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Items: 1 to 20 of 50

1.

Composition and Drivers of Gut Microbial Communities in Arctic-Breeding Shorebirds.

Grond K, Santo Domingo JW, Lanctot RB, Jumpponen A, Bentzen RL, Boldenow ML, Brown SC, Casler B, Cunningham JA, Doll AC, Freeman S, Hill BL, Kendall SJ, Kwon E, Liebezeit JR, Pirie-Dominix L, Rausch J, Sandercock BK.

Front Microbiol. 2019 Oct 9;10:2258. doi: 10.3389/fmicb.2019.02258. eCollection 2019.

2.

Metaphenomic Responses of a Native Prairie Soil Microbiome to Moisture Perturbations.

Roy Chowdhury T, Lee JY, Bottos EM, Brislawn CJ, White RA 3rd, Bramer LM, Brown J, Zucker JD, Kim YM, Jumpponen A, Rice CW, Fansler SJ, Metz TO, McCue LA, Callister SJ, Song HS, Jansson JK.

mSystems. 2019 Jun 11;4(4). pii: e00061-19. doi: 10.1128/mSystems.00061-19.

3.

Chestnuts bred for blight resistance depart nursery with distinct fungal rhizobiomes.

Reazin C, Baird R, Clark S, Jumpponen A.

Mycorrhiza. 2019 Jul;29(4):313-324. doi: 10.1007/s00572-019-00897-z. Epub 2019 May 25.

PMID:
31129728
4.

DNA metabarcoding-Need for robust experimental designs to draw sound ecological conclusions.

Zinger L, Bonin A, Alsos IG, Bálint M, Bik H, Boyer F, Chariton AA, Creer S, Coissac E, Deagle BE, De Barba M, Dickie IA, Dumbrell AJ, Ficetola GF, Fierer N, Fumagalli L, Gilbert MTP, Jarman S, Jumpponen A, Kauserud H, Orlando L, Pansu J, Pawlowski J, Tedersoo L, Thomsen PF, Willerslev E, Taberlet P.

Mol Ecol. 2019 Apr;28(8):1857-1862. doi: 10.1111/mec.15060. Epub 2019 Apr 29. No abstract available.

5.

Microbial Ecology of Snow Reveals Taxa-Specific Biogeographical Structure.

Brown SP, Jumpponen A.

Microb Ecol. 2019 May;77(4):946-958. doi: 10.1007/s00248-019-01357-z. Epub 2019 Mar 13.

PMID:
30868207
6.

Rootstocks Shape the Rhizobiome: Rhizosphere and Endosphere Bacterial Communities in the Grafted Tomato System.

Poudel R, Jumpponen A, Kennelly MM, Rivard CL, Gomez-Montano L, Garrett KA.

Appl Environ Microbiol. 2019 Jan 9;85(2). pii: e01765-18. doi: 10.1128/AEM.01765-18. Print 2019 Jan 15.

7.

Nitrogen enrichment suppresses other environmental drivers and homogenizes salt marsh leaf microbiome.

Daleo P, Alberti J, Jumpponen A, Veach A, Ialonardi F, Iribarne O, Silliman B.

Ecology. 2018 Jun;99(6):1411-1418. doi: 10.1002/ecy.2240. Epub 2018 May 16.

PMID:
29645089
8.

Half-lives of PAHs and temporal microbiota changes in commonly used urban landscaping materials.

Roslund MI, Grönroos M, Rantalainen AL, Jumpponen A, Romantschuk M, Parajuli A, Hyöty H, Laitinen O, Sinkkonen A.

PeerJ. 2018 Mar 19;6:e4508. doi: 10.7717/peerj.4508. eCollection 2018.

9.

Urbanization Reduces Transfer of Diverse Environmental Microbiota Indoors.

Parajuli A, Grönroos M, Siter N, Puhakka R, Vari HK, Roslund MI, Jumpponen A, Nurminen N, Laitinen OH, Hyöty H, Rajaniemi J, Sinkkonen A.

Front Microbiol. 2018 Feb 5;9:84. doi: 10.3389/fmicb.2018.00084. eCollection 2018.

10.

Fire frequency drives decadal changes in soil carbon and nitrogen and ecosystem productivity.

Pellegrini AFA, Ahlström A, Hobbie SE, Reich PB, Nieradzik LP, Staver AC, Scharenbroch BC, Jumpponen A, Anderegg WRL, Randerson JT, Jackson RB.

Nature. 2018 Jan 11;553(7687):194-198. doi: 10.1038/nature24668. Epub 2017 Dec 11.

PMID:
29227988
11.

Fungal Communities and Functional Guilds Shift Along an Elevational Gradient in the Southern Appalachian Mountains.

Veach AM, Stokes CE, Knoepp J, Jumpponen A, Baird R.

Microb Ecol. 2018 Jul;76(1):156-168. doi: 10.1007/s00248-017-1116-6. Epub 2017 Dec 4.

PMID:
29204781
12.

The abundance of health-associated bacteria is altered in PAH polluted soils-Implications for health in urban areas?

Parajuli A, Grönroos M, Kauppi S, Płociniczak T, Roslund MI, Galitskaya P, Laitinen OH, Hyöty H, Jumpponen A, Strömmer R, Romantschuk M, Hui N, Sinkkonen A.

PLoS One. 2017 Nov 16;12(11):e0187852. doi: 10.1371/journal.pone.0187852. eCollection 2017.

13.

Recruitment and establishment of the gut microbiome in arctic shorebirds.

Grond K, Lanctot RB, Jumpponen A, Sandercock BK.

FEMS Microbiol Ecol. 2017 Dec 1;93(12). doi: 10.1093/femsec/fix142.

PMID:
29069418
14.

Ectomycorrhizal Fungal Communities in Urban Parks Are Similar to Those in Natural Forests but Shaped by Vegetation and Park Age.

Hui N, Liu X, Kotze DJ, Jumpponen A, Francini G, Setälä H.

Appl Environ Microbiol. 2017 Nov 16;83(23). pii: e01797-17. doi: 10.1128/AEM.01797-17. Print 2017 Dec 1.

15.

Soil microbial communities are shaped by vegetation type and park age in cities under cold climate.

Hui N, Jumpponen A, Francini G, Kotze DJ, Liu X, Romantschuk M, Strömmer R, Setälä H.

Environ Microbiol. 2017 Mar;19(3):1281-1295. doi: 10.1111/1462-2920.13660. Epub 2017 Feb 1.

PMID:
28063185
16.

Vertical and seasonal dynamics of fungal communities in boreal Scots pine forest soil.

Santalahti M, Sun H, Jumpponen A, Pennanen T, Heinonsalo J.

FEMS Microbiol Ecol. 2016 Nov;92(11). pii: fiw170. doi: 10.1093/femsec/fiw170. Epub 2016 Aug 10.

PMID:
27515733
17.

Spatial and successional dynamics of microbial biofilm communities in a grassland stream ecosystem.

Veach AM, Stegen JC, Brown SP, Dodds WK, Jumpponen A.

Mol Ecol. 2016 Sep;25(18):4674-88. doi: 10.1111/mec.13784. Epub 2016 Sep 6.

PMID:
27481285
18.

Habitat conditions and phenological tree traits overrule the influence of tree genotype in the needle mycobiome-Picea glauca system at an arctic treeline ecotone.

Eusemann P, Schnittler M, Nilsson RH, Jumpponen A, Dahl MB, Würth DG, Buras A, Wilmking M, Unterseher M.

New Phytol. 2016 Sep;211(4):1221-31. doi: 10.1111/nph.13988. Epub 2016 May 4.

19.

Woody plant encroachment, and its removal, impact bacterial and fungal communities across stream and terrestrial habitats in a tallgrass prairie ecosystem.

Veach AM, Dodds WK, Jumpponen A.

FEMS Microbiol Ecol. 2015 Oct;91(10). pii: fiv109. doi: 10.1093/femsec/fiv109. Epub 2015 Sep 6.

PMID:
26347079
20.

Fungal Community Shifts in Structure and Function across a Boreal Forest Fire Chronosequence.

Sun H, Santalahti M, Pumpanen J, Köster K, Berninger F, Raffaello T, Jumpponen A, Asiegbu FO, Heinonsalo J.

Appl Environ Microbiol. 2015 Nov;81(22):7869-80. doi: 10.1128/AEM.02063-15. Epub 2015 Sep 4.

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