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Items: 15

1.

Repertoire of the Bacillus thuringiensis Virulence Factors Unrelated to Major Classes of Protein Toxins and Its Role in Specificity of Host-Pathogen Interactions.

Malovichko YV, Nizhnikov AA, Antonets KS.

Toxins (Basel). 2019 Jun 17;11(6). pii: E347. doi: 10.3390/toxins11060347. Review.

2.

RNA Sequencing Reveals Specific TranscriptomicSignatures Distinguishing Effects of the [SWI⁺] Prion and SWI1 Deletion in Yeast Saccharomyces cerevisiae.

Malovichko YV, Antonets KS, Maslova AR, Andreeva EA, Inge-Vechtomov SG, Nizhnikov AA.

Genes (Basel). 2019 Mar 12;10(3). pii: E212. doi: 10.3390/genes10030212.

3.

Protein Co-Aggregation Related to Amyloids: Methods of Investigation, Diversity, and Classification.

Bondarev SA, Antonets KS, Kajava AV, Nizhnikov AA, Zhouravleva GA.

Int J Mol Sci. 2018 Aug 4;19(8). pii: E2292. doi: 10.3390/ijms19082292. Review.

4.

Exploring Proteins Containing Amyloidogenic Regions in the Proteomes of Bacteria of the Order Rhizobiales.

Antonets KS, Kliver SF, Nizhnikov AA.

Evol Bioinform Online. 2018 Apr 9;14:1176934318768781. doi: 10.1177/1176934318768781. eCollection 2018.

5.

M60-like metalloprotease domain of the Escherichia coli YghJ protein forms amyloid fibrils.

Belousov MV, Bondarev SA, Kosolapova AO, Antonets KS, Sulatskaya AI, Sulatsky MI, Zhouravleva GA, Kuznetsova IM, Turoverov KK, Nizhnikov AA.

PLoS One. 2018 Jan 30;13(1):e0191317. doi: 10.1371/journal.pone.0191317. eCollection 2018.

6.

Predicting Amyloidogenic Proteins in the Proteomes of Plants.

Antonets KS, Nizhnikov AA.

Int J Mol Sci. 2017 Oct 16;18(10). pii: E2155. doi: 10.3390/ijms18102155.

7.

Screening for amyloid proteins in the yeast proteome.

Ryzhova TA, Sopova JV, Zadorsky SP, Siniukova VA, Sergeeva AV, Galkina SA, Nizhnikov AA, Shenfeld AA, Volkov KV, Galkin AP.

Curr Genet. 2018 Apr;64(2):469-478. doi: 10.1007/s00294-017-0759-7. Epub 2017 Oct 11.

PMID:
29027580
8.

Interaction of Prions Causes Heritable Traits in Saccharomyces cerevisiae.

Nizhnikov AA, Ryzhova TA, Volkov KV, Zadorsky SP, Sopova JV, Inge-Vechtomov SG, Galkin AP.

PLoS Genet. 2016 Dec 27;12(12):e1006504. doi: 10.1371/journal.pgen.1006504. eCollection 2016 Dec.

9.

SFP1-mediated prion-dependent lethality is caused by increased Sup35 aggregation and alleviated by Sis1.

Matveenko AG, Drozdova PB, Belousov MV, Moskalenko SE, Bondarev SA, Barbitoff YA, Nizhnikov AA, Zhouravleva GA.

Genes Cells. 2016 Dec;21(12):1290-1308. doi: 10.1111/gtc.12444. Epub 2016 Oct 12.

10.

Prions, amyloids, and RNA: Pieces of a puzzle.

Nizhnikov AA, Antonets KS, Bondarev SA, Inge-Vechtomov SG, Derkatch IL.

Prion. 2016 May 3;10(3):182-206. doi: 10.1080/19336896.2016.1181253. Review.

11.

Proteomic screening for amyloid proteins.

Nizhnikov AA, Alexandrov AI, Ryzhova TA, Mitkevich OV, Dergalev AA, Ter-Avanesyan MD, Galkin AP.

PLoS One. 2014 Dec 30;9(12):e116003. doi: 10.1371/journal.pone.0116003. eCollection 2014.

12.

Modulation of efficiency of translation termination in Saccharomyces cerevisiae.

Nizhnikov AA, Antonets KS, Inge-Vechtomov SG, Derkatch IL.

Prion. 2014;8(3):247-60. doi: 10.4161/pri.29851. Epub 2014 Nov 1. Review.

13.

SARP: A Novel Algorithm to Assess Compositional Biases in Protein Sequences.

Antonets KS, Nizhnikov AA.

Evol Bioinform Online. 2013 Jul 11;9:263-73. doi: 10.4137/EBO.S12299. Print 2013.

14.

[NSI+] determinant has a pleiotropic phenotypic manifestation that is modulated by SUP35, SUP45, and VTS1 genes.

Nizhnikov AA, Magomedova ZM, Rubel AA, Kondrashkina AM, Inge-Vechtomov SG, Galkin AP.

Curr Genet. 2012 Feb;58(1):35-47. doi: 10.1007/s00294-011-0363-1. Epub 2012 Jan 4.

PMID:
22215010
15.

[NSI (+)]: a novel non-Mendelian nonsense suppressor determinant in Saccharomyces cerevisiae.

Saifitdinova AF, Nizhnikov AA, Lada AG, Rubel AA, Magomedova ZM, Ignatova VV, Inge-Vechtomov SG, Galkin AP.

Curr Genet. 2010 Oct;56(5):467-78. doi: 10.1007/s00294-010-0314-2. Epub 2010 Jul 29.

PMID:
20668856

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