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Items: 1 to 20 of 201

1.

Preferential insertion of a Ty1 LTR-retrotransposon into the A sub-genome's HD1 gene significantly correlated with the reduction in stem trichomes of tetraploid cotton.

Tang M, Wu X, Cao Y, Qin Y, Ding M, Jiang Y, Sun C, Zhang H, Paterson AH, Rong J.

Mol Genet Genomics. 2019 Aug 16. doi: 10.1007/s00438-019-01602-7. [Epub ahead of print]

PMID:
31420737
2.

Molecular Dissection of Quantitative Variation in Bermudagrass Hybrids (Cynodon dactylon x transvaalensis): Morphological Traits.

Khanal S, Dunne JC, Schwartz BM, Kim C, Milla-Lewis S, Raymer PL, Hanna WW, Adhikari J, Auckland SA, Rainville L, Paterson AH.

G3 (Bethesda). 2019 Aug 8;9(8):2581-2596. doi: 10.1534/g3.119.400061.

3.

The genome of cultivated peanut provides insight into legume karyotypes, polyploid evolution and crop domestication.

Zhuang W, Chen H, Yang M, Wang J, Pandey MK, Zhang C, Chang WC, Zhang L, Zhang X, Tang R, Garg V, Wang X, Tang H, Chow CN, Wang J, Deng Y, Wang D, Khan AW, Yang Q, Cai T, Bajaj P, Wu K, Guo B, Zhang X, Li J, Liang F, Hu J, Liao B, Liu S, Chitikineni A, Yan H, Zheng Y, Shan S, Liu Q, Xie D, Wang Z, Khan SA, Ali N, Zhao C, Li X, Luo Z, Zhang S, Zhuang R, Peng Z, Wang S, Mamadou G, Zhuang Y, Zhao Z, Yu W, Xiong F, Quan W, Yuan M, Li Y, Zou H, Xia H, Zha L, Fan J, Yu J, Xie W, Yuan J, Chen K, Zhao S, Chu W, Chen Y, Sun P, Meng F, Zhuo T, Zhao Y, Li C, He G, Zhao Y, Wang C, Kavikishor PB, Pan RL, Paterson AH, Wang X, Ming R, Varshney RK.

Nat Genet. 2019 May;51(5):865-876. doi: 10.1038/s41588-019-0402-2. Epub 2019 May 1.

PMID:
31043757
4.

Sequencing of Cultivated Peanut, Arachis hypogaea, Yields Insights into Genome Evolution and Oil Improvement.

Chen X, Lu Q, Liu H, Zhang J, Hong Y, Lan H, Li H, Wang J, Liu H, Li S, Pandey MK, Zhang Z, Zhou G, Yu J, Zhang G, Yuan J, Li X, Wen S, Meng F, Yu S, Wang X, Siddique KHM, Liu ZJ, Paterson AH, Varshney RK, Liang X.

Mol Plant. 2019 Jul 1;12(7):920-934. doi: 10.1016/j.molp.2019.03.005. Epub 2019 Mar 19.

5.

Whole-genome resequencing reveals Brassica napus origin and genetic loci involved in its improvement.

Lu K, Wei L, Li X, Wang Y, Wu J, Liu M, Zhang C, Chen Z, Xiao Z, Jian H, Cheng F, Zhang K, Du H, Cheng X, Qu C, Qian W, Liu L, Wang R, Zou Q, Ying J, Xu X, Mei J, Liang Y, Chai YR, Tang Z, Wan H, Ni Y, He Y, Lin N, Fan Y, Sun W, Li NN, Zhou G, Zheng H, Wang X, Paterson AH, Li J.

Nat Commun. 2019 Mar 11;10(1):1154. doi: 10.1038/s41467-019-09134-9.

6.

Multispectral imaging and unmanned aerial systems for cotton plant phenotyping.

Xu R, Li C, Paterson AH.

PLoS One. 2019 Feb 27;14(2):e0205083. doi: 10.1371/journal.pone.0205083. eCollection 2019.

7.

Gene duplication and evolution in recurring polyploidization-diploidization cycles in plants.

Qiao X, Li Q, Yin H, Qi K, Li L, Wang R, Zhang S, Paterson AH.

Genome Biol. 2019 Feb 21;20(1):38. doi: 10.1186/s13059-019-1650-2.

8.

Gene duplication and genetic innovation in cereal genomes.

Guo H, Jiao Y, Tan X, Wang X, Huang X, Jin H, Paterson AH.

Genome Res. 2019 Feb;29(2):261-269. doi: 10.1101/gr.237511.118. Epub 2019 Jan 16.

9.

Joint QTL mapping and transcriptome sequencing analysis reveal candidate flowering time genes in Brassica napus L.

Jian H, Zhang A, Ma J, Wang T, Yang B, Shuang LS, Liu M, Li J, Xu X, Paterson AH, Liu L.

BMC Genomics. 2019 Jan 9;20(1):21. doi: 10.1186/s12864-018-5356-8.

10.

Publisher Correction: Allele-defined genome of the autopolyploid sugarcane Saccharum spontaneum L.

Zhang J, Zhang X, Tang H, Zhang Q, Hua X, Ma X, Zhu F, Jones T, Zhu X, Bowers J, Wai CM, Zheng C, Shi Y, Chen S, Xu X, Yue J, Nelson DR, Huang L, Li Z, Xu H, Zhou D, Wang Y, Hu W, Lin J, Deng Y, Pandey N, Mancini M, Zerpa D, Nguyen JK, Wang L, Yu L, Xin Y, Ge L, Arro J, Han JO, Chakrabarty S, Pushko M, Zhang W, Ma Y, Ma P, Lv M, Chen F, Zheng G, Xu J, Yang Z, Deng F, Chen X, Liao Z, Zhang X, Lin Z, Lin H, Yan H, Kuang Z, Zhong W, Liang P, Wang G, Yuan Y, Shi J, Hou J, Lin J, Jin J, Cao P, Shen Q, Jiang Q, Zhou P, Ma Y, Zhang X, Xu R, Liu J, Zhou Y, Jia H, Ma Q, Qi R, Zhang Z, Fang J, Fang H, Song J, Wang M, Dong G, Wang G, Chen Z, Ma T, Liu H, Dhungana SR, Huss SE, Yang X, Sharma A, Trujillo JH, Martinez MC, Hudson M, Riascos JJ, Schuler M, Chen LQ, Braun DM, Li L, Yu Q, Wang J, Wang K, Schatz MC, Heckerman D, Van Sluys MA, Souza GM, Moore PH, Sankoff D, VanBuren R, Paterson AH, Nagai C, Ming R.

Nat Genet. 2018 Dec;50(12):1754. doi: 10.1038/s41588-018-0293-7.

PMID:
30425353
11.

Allele-defined genome of the autopolyploid sugarcane Saccharum spontaneum L.

Zhang J, Zhang X, Tang H, Zhang Q, Hua X, Ma X, Zhu F, Jones T, Zhu X, Bowers J, Wai CM, Zheng C, Shi Y, Chen S, Xu X, Yue J, Nelson DR, Huang L, Li Z, Xu H, Zhou D, Wang Y, Hu W, Lin J, Deng Y, Pandey N, Mancini M, Zerpa D, Nguyen JK, Wang L, Yu L, Xin Y, Ge L, Arro J, Han JO, Chakrabarty S, Pushko M, Zhang W, Ma Y, Ma P, Lv M, Chen F, Zheng G, Xu J, Yang Z, Deng F, Chen X, Liao Z, Zhang X, Lin Z, Lin H, Yan H, Kuang Z, Zhong W, Liang P, Wang G, Yuan Y, Shi J, Hou J, Lin J, Jin J, Cao P, Shen Q, Jiang Q, Zhou P, Ma Y, Zhang X, Xu R, Liu J, Zhou Y, Jia H, Ma Q, Qi R, Zhang Z, Fang J, Fang H, Song J, Wang M, Dong G, Wang G, Chen Z, Ma T, Liu H, Dhungana SR, Huss SE, Yang X, Sharma A, Trujillo JH, Martinez MC, Hudson M, Riascos JJ, Schuler M, Chen LQ, Braun DM, Li L, Yu Q, Wang J, Wang K, Schatz MC, Heckerman D, Van Sluys MA, Souza GM, Moore PH, Sankoff D, VanBuren R, Paterson AH, Nagai C, Ming R.

Nat Genet. 2018 Nov;50(11):1565-1573. doi: 10.1038/s41588-018-0237-2. Epub 2018 Oct 8. Erratum in: Nat Genet. 2018 Dec;50(12):1754.

PMID:
30297971
12.

Subtropical adaptation of a temperate plant (Brassica oleracea var. italica) utilizes non-vernalization-responsive QTLs.

Lin YR, Lee JY, Tseng MC, Lee CY, Shen CH, Wang CS, Liou CC, Shuang LS, Paterson AH, Hwu KK.

Sci Rep. 2018 Sep 11;8(1):13609. doi: 10.1038/s41598-018-31987-1.

13.

Genotyping by Sequencing of 393 Sorghum bicolor BTx623 × IS3620C Recombinant Inbred Lines Improves Sensitivity and Resolution of QTL Detection.

Kong W, Kim C, Zhang D, Guo H, Tan X, Jin H, Zhou C, Shuang LS, Goff V, Sezen U, Pierce G, Compton R, Lemke C, Robertson J, Rainville L, Auckland S, Paterson AH.

G3 (Bethesda). 2018 Jul 31;8(8):2563-2572. doi: 10.1534/g3.118.200173.

14.

Genome and evolution of the shade-requiring medicinal herb Panax ginseng.

Kim NH, Jayakodi M, Lee SC, Choi BS, Jang W, Lee J, Kim HH, Waminal NE, Lakshmanan M, van Nguyen B, Lee YS, Park HS, Koo HJ, Park JY, Perumal S, Joh HJ, Lee H, Kim J, Kim IS, Kim K, Koduru L, Kang KB, Sung SH, Yu Y, Park DS, Choi D, Seo E, Kim S, Kim YC, Hyun DY, Park YI, Kim C, Lee TH, Kim HU, Soh MS, Lee Y, In JG, Kim HS, Kim YM, Yang DC, Wing RA, Lee DY, Paterson AH, Yang TJ.

Plant Biotechnol J. 2018 Nov;16(11):1904-1917. doi: 10.1111/pbi.12926. Epub 2018 May 25.

15.

Genetic Analysis of Gossypium Fiber Quality Traits in Reciprocal Advanced Backcross Populations.

Chandnani R, Kim C, Guo H, Shehzad T, Wallace JG, He D, Zhang Z, Patel JD, Adhikari J, Khanal S, Paterson AH.

Plant Genome. 2018 Mar;11(1). doi: 10.3835/plantgenome2017.06.0057.

16.

Aerial Images and Convolutional Neural Network for Cotton Bloom Detection.

Xu R, Li C, Paterson AH, Jiang Y, Sun S, Robertson JS.

Front Plant Sci. 2018 Feb 16;8:2235. doi: 10.3389/fpls.2017.02235. eCollection 2017.

17.

Quantitative Analysis of Cotton Canopy Size in Field Conditions Using a Consumer-Grade RGB-D Camera.

Jiang Y, Li C, Paterson AH, Sun S, Xu R, Robertson J.

Front Plant Sci. 2018 Jan 30;8:2233. doi: 10.3389/fpls.2017.02233. eCollection 2017.

18.

In-field High Throughput Phenotyping and Cotton Plant Growth Analysis Using LiDAR.

Sun S, Li C, Paterson AH, Jiang Y, Xu R, Robertson JS, Snider JL, Chee PW.

Front Plant Sci. 2018 Jan 22;9:16. doi: 10.3389/fpls.2018.00016. eCollection 2018.

19.

GPhenoVision: A Ground Mobile System with Multi-modal Imaging for Field-Based High Throughput Phenotyping of Cotton.

Jiang Y, Li C, Robertson JS, Sun S, Xu R, Paterson AH.

Sci Rep. 2018 Jan 19;8(1):1213. doi: 10.1038/s41598-018-19142-2.

20.

Advanced Backcross QTL Analysis of Fiber Strength and Fineness in a Cross between Gossypium hirsutum and G. mustelinum.

Wang B, Zhuang Z, Zhang Z, Draye X, Shuang LS, Shehzad T, Lubbers EL, Jones D, May OL, Paterson AH, Chee PW.

Front Plant Sci. 2017 Oct 25;8:1848. doi: 10.3389/fpls.2017.01848. eCollection 2017.

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