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Items: 1 to 20 of 26

1.

Universal Dermal Microbiome in Human Skin.

Bay L, Barnes CJ, Fritz BG, Thorsen J, Restrup MEM, Rasmussen L, Sørensen JK, Hesselvig AB, Odgaard A, Hansen AJ, Bjarnsholt T.

mBio. 2020 Feb 11;11(1). pii: e02945-19. doi: 10.1128/mBio.02945-19.

2.

A systematic survey of regional multi-taxon biodiversity: evaluating strategies and coverage.

Brunbjerg AK, Bruun HH, Brøndum L, Classen AT, Dalby L, Fog K, Frøslev TG, Goldberg I, Hansen AJ, Hansen MDD, Høye TT, Illum AA, Læssøe T, Newman GS, Skipper L, Søchting U, Ejrnæs R.

BMC Ecol. 2019 Oct 15;19(1):43. doi: 10.1186/s12898-019-0260-x.

3.

Predicting provenance of forensic soil samples: Linking soil to ecological habitats by metabarcoding and supervised classification.

Fløjgaard C, Frøslev TG, Brunbjerg AK, Bruun HH, Moeslund J, Hansen AJ, Ejrnæs R.

PLoS One. 2019 Jul 8;14(7):e0202844. doi: 10.1371/journal.pone.0202844. eCollection 2019.

4.

High-Throughput Sequencing-Based Investigation of Viruses in Human Cancers by Multienrichment Approach.

Mollerup S, Asplund M, Friis-Nielsen J, Kjartansdóttir KR, Fridholm H, Hansen TA, Herrera JAR, Barnes CJ, Jensen RH, Richter SR, Nielsen IB, Pietroni C, Alquezar-Planas DE, Rey-Iglesia A, Olsen PVS, Rajpert-De Meyts E, Groth-Pedersen L, von Buchwald C, Jensen DH, Gniadecki R, Høgdall E, Langhoff JL, Pete I, Vereczkey I, Baranyai Z, Dybkaer K, Johnsen HE, Steiniche T, Hokland P, Rosenberg J, Baandrup U, Sicheritz-Pontén T, Willerslev E, Brunak S, Lund O, Mourier T, Vinner L, Izarzugaza JMG, Nielsen LP, Hansen AJ.

J Infect Dis. 2019 Sep 13;220(8):1312-1324. doi: 10.1093/infdis/jiz318.

5.

High-throughput sequencing reveals no viral pathogens in eight cases of ocular adnexal extranodal marginal zone B-cell lymphoma.

Mollerup S, Mikkelsen LH, Hansen AJ, Heegaard S.

Exp Eye Res. 2019 Aug;185:107677. doi: 10.1016/j.exer.2019.05.017. Epub 2019 May 23.

PMID:
31129254
6.

Metagenomic analysis of viruses in toilet waste from long distance flights-A new procedure for global infectious disease surveillance.

Hjelmsø MH, Mollerup S, Jensen RH, Pietroni C, Lukjancenko O, Schultz AC, Aarestrup FM, Hansen AJ.

PLoS One. 2019 Jan 14;14(1):e0210368. doi: 10.1371/journal.pone.0210368. eCollection 2019.

7.

MobiSeq: De novo SNP discovery in model and non-model species through sequencing the flanking region of transposable elements.

Rey-Iglesia A, Gopalakrishan S, Carøe C, Alquezar-Planas DE, Ahlmann Nielsen A, Röder T, Bruhn Pedersen L, Naesborg-Nielsen C, Sinding MS, Fredensborg Rath M, Li Z, Petersen B, Gilbert MTP, Bunce M, Mourier T, Hansen AJ.

Mol Ecol Resour. 2019 Mar;19(2):512-525. doi: 10.1111/1755-0998.12984. Epub 2019 Feb 6.

PMID:
30575257
8.

Parasitic infections and resource economy of Danish Iron Age settlement through ancient DNA sequencing.

Tams KW, Jensen Søe M, Merkyte I, Valeur Seersholm F, Henriksen PS, Klingenberg S, Willerslev E, Kjær KH, Hansen AJ, Kapel CMO.

PLoS One. 2018 Jun 20;13(6):e0197399. doi: 10.1371/journal.pone.0197399. eCollection 2018.

9.

Circular DNA elements of chromosomal origin are common in healthy human somatic tissue.

Møller HD, Mohiyuddin M, Prada-Luengo I, Sailani MR, Halling JF, Plomgaard P, Maretty L, Hansen AJ, Snyder MP, Pilegaard H, Lam HYK, Regenberg B.

Nat Commun. 2018 Mar 14;9(1):1069. doi: 10.1038/s41467-018-03369-8.

10.

Correction to: Cancer associated fibroblasts (CAFs) are activated in cutaneous basal cell carcinoma and in the peritumoural skin.

Omland SH, Wettergren EE, Mollerup S, Asplund M, Mourier T, Hansen AJ, Gniadecki R.

BMC Cancer. 2018 Jan 30;18(1):111. doi: 10.1186/s12885-018-3987-4.

11.

Mitochondrial DNA of pre-last glacial maximum red deer from NW Spain suggests a more complex phylogeographical history for the species.

Rey-Iglesia A, Grandal-d'Anglade A, Campos PF, Hansen AJ.

Ecol Evol. 2017 Nov 7;7(24):10690-10700. doi: 10.1002/ece3.3553. eCollection 2017 Dec.

12.

Algorithm for post-clustering curation of DNA amplicon data yields reliable biodiversity estimates.

Frøslev TG, Kjøller R, Bruun HH, Ejrnæs R, Brunbjerg AK, Pietroni C, Hansen AJ.

Nat Commun. 2017 Oct 30;8(1):1188. doi: 10.1038/s41467-017-01312-x.

13.

Cancer associated fibroblasts (CAFs) are activated in cutaneous basal cell carcinoma and in the peritumoural skin.

Omland SH, Wettergren EE, Mollerup S, Asplund M, Mourier T, Hansen AJ, Gniadecki R.

BMC Cancer. 2017 Oct 7;17(1):675. doi: 10.1186/s12885-017-3663-0. Erratum in: BMC Cancer. 2018 Jan 30;18(1):111.

14.

Substitutions of short heterologous DNA segments of intragenomic or extragenomic origins produce clustered genomic polymorphisms.

Harms K, Lunnan A, Hülter N, Mourier T, Vinner L, Andam CP, Marttinen P, Fridholm H, Hansen AJ, Hanage WP, Nielsen KM, Willerslev E, Johnsen PJ.

Proc Natl Acad Sci U S A. 2016 Dec 27;113(52):15066-15071. doi: 10.1073/pnas.1615819114. Epub 2016 Dec 12.

15.

DNA evidence of bowhead whale exploitation by Greenlandic Paleo-Inuit 4,000 years ago.

Seersholm FV, Pedersen MW, Søe MJ, Shokry H, Mak SS, Ruter A, Raghavan M, Fitzhugh W, Kjær KH, Willerslev E, Meldgaard M, Kapel CM, Hansen AJ.

Nat Commun. 2016 Nov 8;7:13389. doi: 10.1038/ncomms13389.

16.

High diversity of picornaviruses in rats from different continents revealed by deep sequencing.

Hansen TA, Mollerup S, Nguyen NP, White NE, Coghlan M, Alquezar-Planas DE, Joshi T, Jensen RH, Fridholm H, Kjartansdóttir KR, Mourier T, Warnow T, Belsham GJ, Bunce M, Willerslev E, Nielsen LP, Vinner L, Hansen AJ.

Emerg Microbes Infect. 2016 Aug 17;5(8):e90. doi: 10.1038/emi.2016.90.

17.

Vancomycin gene selection in the microbiome of urban Rattus norvegicus from hospital environment.

Hansen TA, Joshi T, Larsen AR, Andersen PS, Harms K, Mollerup S, Willerslev E, Fuursted K, Nielsen LP, Hansen AJ.

Evol Med Public Health. 2016 Aug 3;2016(1):219-26. doi: 10.1093/emph/eow021. Print 2016.

18.

Identification of Known and Novel Recurrent Viral Sequences in Data from Multiple Patients and Multiple Cancers.

Friis-Nielsen J, Kjartansdóttir KR, Mollerup S, Asplund M, Mourier T, Jensen RH, Hansen TA, Rey-Iglesia A, Richter SR, Nielsen IB, Alquezar-Planas DE, Olsen PV, Vinner L, Fridholm H, Nielsen LP, Willerslev E, Sicheritz-Pontén T, Lund O, Hansen AJ, Izarzugaza JM, Brunak S.

Viruses. 2016 Feb 19;8(2). pii: E53. doi: 10.3390/v8020053.

19.

Propionibacterium acnes: Disease-Causing Agent or Common Contaminant? Detection in Diverse Patient Samples by Next-Generation Sequencing.

Mollerup S, Friis-Nielsen J, Vinner L, Hansen TA, Richter SR, Fridholm H, Herrera JA, Lund O, Brunak S, Izarzugaza JM, Mourier T, Nielsen LP, Hansen AJ.

J Clin Microbiol. 2016 Apr;54(4):980-7. doi: 10.1128/JCM.02723-15. Epub 2016 Jan 27.

20.

Formation of Extrachromosomal Circular DNA from Long Terminal Repeats of Retrotransposons in Saccharomyces cerevisiae.

Møller HD, Larsen CE, Parsons L, Hansen AJ, Regenberg B, Mourier T.

G3 (Bethesda). 2015 Dec 17;6(2):453-62. doi: 10.1534/g3.115.025858.

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