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Items: 1 to 20 of 63


A single-cell transcriptome atlas of the adult human retina.

Lukowski SW, Lo CY, Sharov AA, Nguyen Q, Fang L, Hung SS, Zhu L, Zhang T, GrĂ¼nert U, Nguyen T, Senabouth A, Jabbari JS, Welby E, Sowden JC, Waugh HS, Mackey A, Pollock G, Lamb TD, Wang PY, Hewitt AW, Gillies MC, Powell JE, Wong RC.

EMBO J. 2019 Sep 16;38(18):e100811. doi: 10.15252/embj.2018100811. Epub 2019 Aug 22.


Composite Agency: Semiotics of Modularity and Guiding Interactions.

Sharov AA.

Biosemiotics. 2017 Jul;10(2):157-178. doi: 10.1007/s12304-017-9301-z. Epub 2017 Jul 27.


Evolutionary biosemiotics and multilevel construction networks.

Sharov AA.

Biosemiotics. 2016 Dec;9(3):399-416. doi: 10.1007/s12304-016-9269-0. Epub 2016 Aug 16.


Induction of specific neuron types by overexpression of single transcription factors.

Teratani-Ota Y, Yamamizu K, Piao Y, Sharova L, Amano M, Yu H, Schlessinger D, Ko MS, Sharov AA.

In Vitro Cell Dev Biol Anim. 2016 Oct;52(9):961-973. Epub 2016 Jun 1.


Generation and gene expression profiling of 48 transcription-factor-inducible mouse embryonic stem cell lines.

Yamamizu K, Sharov AA, Piao Y, Amano M, Yu H, Nishiyama A, Dudekula DB, Schlessinger D, Ko MS.

Sci Rep. 2016 May 6;6:25667. doi: 10.1038/srep25667.


Emergence of undifferentiated colonies from mouse embryonic stem cells undergoing differentiation by retinoic acid treatment.

Sharova LV, Sharov AA, Piao Y, Stagg CA, Amano T, Qian Y, Dudekula D, Schlessinger D, Ko MS.

In Vitro Cell Dev Biol Anim. 2016 May;52(5):616-24. doi: 10.1007/s11626-016-0013-5. Epub 2016 Apr 29.


Coenzyme world model of the origin of life.

Sharov AA.

Biosystems. 2016 Jun;144:8-17. doi: 10.1016/j.biosystems.2016.03.003. Epub 2016 Mar 9. Review.


Transient bursts of Zscan4 expression are accompanied by the rapid derepression of heterochromatin in mouse embryonic stem cells.

Akiyama T, Xin L, Oda M, Sharov AA, Amano M, Piao Y, Cadet JS, Dudekula DB, Qian Y, Wang W, Ko SB, Ko MS.

DNA Res. 2015 Oct;22(5):307-18. doi: 10.1093/dnares/dsv013. Epub 2015 Aug 31.


ExAtlas: An interactive online tool for meta-analysis of gene expression data.

Sharov AA, Schlessinger D, Ko MS.

J Bioinform Comput Biol. 2015 Dec;13(6):1550019. doi: 10.1142/S0219720015500195. Epub 2015 Jun 9.


Protosemiosis: agency with reduced representation capacity.

Sharov AA, Vehkavaara T.

Biosemiotics. 2015 Apr 1;8(1):103-123.


Patterns of evolution.

Igamberdiev AU, Sharov AA.

Biosystems. 2014 Sep;123:1-2. doi: 10.1016/j.biosystems.2014.09.006. Epub 2014 Oct 30. No abstract available.


Inferring directions of evolution from patterns of variation: the legacy of Sergei Meyen.

Sharov AA, Igamberdiev AU.

Biosystems. 2014 Sep;123:67-73. doi: 10.1016/j.biosystems.2014.06.008. Epub 2014 Jul 27.


Evolutionary constraints or opportunities?

Sharov AA.

Biosystems. 2014 Sep;123:9-18. doi: 10.1016/j.biosystems.2014.06.004. Epub 2014 Jul 16.


Chromatin properties of regulatory DNA probed by manipulation of transcription factors.

Sharov AA, Nishiyama A, Qian Y, Dudekula DB, Longo DL, Schlessinger D, Ko MS.

J Comput Biol. 2014 Aug;21(8):569-77. doi: 10.1089/cmb.2013.0126. Epub 2014 Jun 11.


Evolutionary constraints or opportunities?

Sharov AA.

Biosystems. 2014 Apr 22;120C:21-30. doi: 10.1016/j.biosystems.2014.04.005. [Epub ahead of print]


Identification of transcription factors for lineage-specific ESC differentiation.

Yamamizu K, Piao Y, Sharov AA, Zsiros V, Yu H, Nakazawa K, Schlessinger D, Ko MS.

Stem Cell Reports. 2013 Nov 27;1(6):545-59. doi: 10.1016/j.stemcr.2013.10.006. eCollection 2013.


A conserved Oct4/POUV-dependent network links adhesion and migration to progenitor maintenance.

Livigni A, Peradziryi H, Sharov AA, Chia G, Hammachi F, Migueles RP, Sukparangsi W, Pernagallo S, Bradley M, Nichols J, Ko MSH, Brickman JM.

Curr Biol. 2013 Nov 18;23(22):2233-2244. doi: 10.1016/j.cub.2013.09.048. Epub 2013 Nov 7.


Totipotent embryonic stem cells arise in ground-state culture conditions.

Morgani SM, Canham MA, Nichols J, Sharov AA, Migueles RP, Ko MS, Brickman JM.

Cell Rep. 2013 Jun 27;3(6):1945-57. doi: 10.1016/j.celrep.2013.04.034. Epub 2013 Jun 6.


Repression of global protein synthesis by Eif1a-like genes that are expressed specifically in the two-cell embryos and the transient Zscan4-positive state of embryonic stem cells.

Hung SS, Wong RC, Sharov AA, Nakatake Y, Yu H, Ko MS.

DNA Res. 2013 Aug;20(4):391-402. doi: 10.1093/dnares/dst018. Epub 2013 May 5.

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