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Items: 1 to 20 of 248

1.

Microbiome analysis of Ixodes scapularis ticks from New York and Connecticut.

Tokarz R, Tagliafierro T, Sameroff S, Cucura DM, Oleynik A, Che X, Jain K, Lipkin WI.

Ticks Tick Borne Dis. 2019 Apr 15. pii: S1877-959X(19)30033-0. doi: 10.1016/j.ttbdis.2019.04.011. [Epub ahead of print]

2.

A viral metagenomic survey identifies known and novel mammalian viruses in bats from Saudi Arabia.

Mishra N, Fagbo SF, Alagaili AN, Nitido A, Williams SH, Ng J, Lee B, Durosinlorun A, Garcia JA, Jain K, Kapoor V, Epstein JH, Briese T, Memish ZA, Olival KJ, Lipkin WI.

PLoS One. 2019 Apr 10;14(4):e0214227. doi: 10.1371/journal.pone.0214227. eCollection 2019.

3.

A Novel Orthohepadnavirus Identified in a Dead Maxwell's Duiker (Philantomba maxwellii) in Taï National Park, Côte d'Ivoire.

Gogarten JF, Ulrich M, Bhuva N, Garcia J, Jain K, Lee B, Löhrich T, Oleynik A, Couacy-Hymann E, Fuh Neba T, Mishra N, Briese T, Calvignac-Spencer S, Lipkin WI, Leendertz FH.

Viruses. 2019 Mar 19;11(3). pii: E279. doi: 10.3390/v11030279.

4.

DEvis: an R package for aggregation and visualization of differential expression data.

Price A, Caciula A, Guo C, Lee B, Morrison J, Rasmussen A, Lipkin WI, Jain K.

BMC Bioinformatics. 2019 Mar 4;20(1):110. doi: 10.1186/s12859-019-2702-z.

5.

Emergence of the East-Central-South-African genotype of Chikungunya virus in Brazil and the city of Rio de Janeiro may have occurred years before surveillance detection.

Souza TML, Vieira YR, Delatorre E, Barbosa-Lima G, Luiz RLF, Vizzoni A, Jain K, Miranda MM, Bhuva N, Gogarten JF, Ng J, Thakkar R, Calheiros AS, Monteiro APT, Bozza PT, Bozza FA, Tschoeke DA, Leomil L, Mendonça MCL, Rodrigues CDDS, Torres MC, Filippis AMB, Nogueira RMR, Thompson FL, Lemos C, Durovni B, Cerbino-Neto J, Morel CM, Lipkin WI, Mishra N.

Sci Rep. 2019 Feb 26;9(1):2760. doi: 10.1038/s41598-019-39406-9.

6.

Higher abundance of enterovirus A species in the gut of children with islet autoimmunity.

Kim KW, Horton JL, Pang CNI, Jain K, Leung P, Isaacs SR, Bull RA, Luciani F, Wilkins MR, Catteau J, Lipkin WI, Rawlinson WD, Briese T, Craig ME.

Sci Rep. 2019 Feb 11;9(1):1749. doi: 10.1038/s41598-018-38368-8.

7.

Interpreting New Evidence on Prenatal Infections and Mental Disorders.

Susser E, Bresnahan M, Lipkin WI.

Biol Psychiatry. 2019 Feb 15;85(4):285-286. doi: 10.1016/j.biopsych.2018.12.004. No abstract available.

PMID:
30665502
8.

Maternal prenatal Tdap not associated with autism development in the child.

Lipkin WI.

J Pediatr. 2019 Jan;204:320-323. doi: 10.1016/j.jpeds.2018.10.074. No abstract available.

PMID:
30579469
9.

Author Correction: The discovery of Bombali virus adds further support for bats as hosts of ebolaviruses.

Goldstein T, Anthony SJ, Gbakima A, Bird BH, Bangura J, Tremeau-Bravard A, Belaganahalli MN, Wells HL, Dhanota JK, Liang E, Grodus M, Jangra RK, DeJesus VA, Lasso G, Smith BR, Jambai A, Kamara BO, Kamara S, Bangura W, Monagin C, Shapira S, Johnson CK, Saylors K, Rubin EM, Chandran K, Lipkin WI, Mazet JAK.

Nat Microbiol. 2018 Dec;3(12):1486. doi: 10.1038/s41564-018-0315-3.

PMID:
30410089
10.

BacCapSeq: a Platform for Diagnosis and Characterization of Bacterial Infections.

Allicock OM, Guo C, Uhlemann AC, Whittier S, Chauhan LV, Garcia J, Price A, Morse SS, Mishra N, Briese T, Lipkin WI.

MBio. 2018 Oct 23;9(5). pii: e02007-18. doi: 10.1128/mBio.02007-18.

11.

Virome Analysis Reveals No Association of Head and Neck Vascular Anomalies with an Active Viral Infection.

Franke N, Bette M, Marquardt A, Briese T, Lipkin WI, Kurz C, Ehrenreich J, Mack E, Baying B, Beneš V, Rodepeter FR, Neff A, Teymoortash A, Eivazi B, Geisthoff U, Stuck BA, Bakowsky U, Mandic R.

In Vivo. 2018 Nov-Dec;32(6):1323-1331. doi: 10.21873/invivo.11382.

12.

Erratum for Williams et al., "Investigation of the Plasma Virome from Cases of Unexplained Febrile Illness in Tanzania from 2013 to 2014: a Comparative Analysis between Unbiased and VirCapSeq-VERT High-Throughput Sequencing Approaches".

Williams SH, Cordey S, Bhuva N, Laubscher F, Hartley MA, Boillat-Blanco N, Mbarack Z, Samaka J, Mlaganile T, Jain K, d'Acremont V, Kaiser L, Lipkin WI.

mSphere. 2018 Sep 19;3(5). pii: e00477-18. doi: 10.1128/mSphere.00477-18. No abstract available.

13.

Correction: miRNA independent hepacivirus variants suggest a strong evolutionary pressure to maintain miR-122 dependence.

Yu Y, Scheel TKH, Luna JM, Chung H, Nishiuchi E, Scull MA, Echeverría N, Ricardo-Lax I, Kapoor A, Lipkin WI, Divers TJ, Antczak DF, Tennant BC, Rice CM.

PLoS Pathog. 2018 Sep 17;14(9):e1007303. doi: 10.1371/journal.ppat.1007303. eCollection 2018 Sep.

14.

The discovery of Bombali virus adds further support for bats as hosts of ebolaviruses.

Goldstein T, Anthony SJ, Gbakima A, Bird BH, Bangura J, Tremeau-Bravard A, Belaganahalli MN, Wells HL, Dhanota JK, Liang E, Grodus M, Jangra RK, DeJesus VA, Lasso G, Smith BR, Jambai A, Kamara BO, Kamara S, Bangura W, Monagin C, Shapira S, Johnson CK, Saylors K, Rubin EM, Chandran K, Lipkin WI, Mazet JAK.

Nat Microbiol. 2018 Oct;3(10):1084-1089. doi: 10.1038/s41564-018-0227-2. Epub 2018 Aug 27. Erratum in: Nat Microbiol. 2018 Dec;3(12):1486.

PMID:
30150734
15.

Investigation of the Plasma Virome from Cases of Unexplained Febrile Illness in Tanzania from 2013 to 2014: a Comparative Analysis between Unbiased and VirCapSeq-VERT High-Throughput Sequencing Approaches.

Williams SH, Cordey S, Bhuva N, Laubscher F, Hartley MA, Boillat-Blanco N, Mbarack Z, Samaka J, Mlaganile T, Jain K, d'Acremont V, Kaiser L, Lipkin WI.

mSphere. 2018 Aug 22;3(4). pii: e00311-18. doi: 10.1128/mSphere.00311-18. Erratum in: mSphere. 2018 Sep 19;3(5):.

16.

Precision surveillance for viral respiratory pathogens: virome capture sequencing for the detection and genomic characterization of severe acute respiratory infection in Uganda.

Cummings MJ, Tokarz R, Bakamutumaho B, Kayiwa J, Byaruhanga T, Owor N, Namagambo B, Wolf A, Mathema B, Lutwama JJ, Schluger NW, Lipkin WI, O'Donnell MR.

Clin Infect Dis. 2018 Aug 7. doi: 10.1093/cid/ciy656. [Epub ahead of print]

PMID:
30099510
17.

Insights into myalgic encephalomyelitis/chronic fatigue syndrome phenotypes through comprehensive metabolomics.

Nagy-Szakal D, Barupal DK, Lee B, Che X, Williams BL, Kahn EJR, Ukaigwe JE, Bateman L, Klimas NG, Komaroff AL, Levine S, Montoya JG, Peterson DL, Levin B, Hornig M, Fiehn O, Lipkin WI.

Sci Rep. 2018 Jul 3;8(1):10056. doi: 10.1038/s41598-018-28477-9.

18.

Gut microbiomes of wild great apes fluctuate seasonally in response to diet.

Hicks AL, Lee KJ, Couto-Rodriguez M, Patel J, Sinha R, Guo C, Olson SH, Seimon A, Seimon TA, Ondzie AU, Karesh WB, Reed P, Cameron KN, Lipkin WI, Williams BL.

Nat Commun. 2018 May 3;9(1):1786. doi: 10.1038/s41467-018-04204-w.

19.

Viral Diversity of House Mice in New York City.

Williams SH, Che X, Garcia JA, Klena JD, Lee B, Muller D, Ulrich W, Corrigan RM, Nichol S, Jain K, Lipkin WI.

MBio. 2018 Apr 17;9(2). pii: e01354-17. doi: 10.1128/mBio.01354-17.

20.

New York City House Mice (Mus musculus) as Potential Reservoirs for Pathogenic Bacteria and Antimicrobial Resistance Determinants.

Williams SH, Che X, Paulick A, Guo C, Lee B, Muller D, Uhlemann AC, Lowy FD, Corrigan RM, Lipkin WI.

MBio. 2018 Apr 17;9(2). pii: e00624-18. doi: 10.1128/mBio.00624-18.

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