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Items: 6

1.

Cellular Gene Expression during Hepatitis C Virus Replication as Revealed by Ribosome Profiling.

Gerresheim GK, Bathke J, Michel AM, Andreev DE, Shalamova LA, Rossbach O, Hu P, Glebe D, Fricke M, Marz M, Goesmann A, Kiniry SJ, Baranov PV, Shatsky IN, Niepmann M.

Int J Mol Sci. 2019 Mar 15;20(6). pii: E1321. doi: 10.3390/ijms20061321.

2.

Trips-Viz: a transcriptome browser for exploring Ribo-Seq data.

Kiniry SJ, O'Connor PBF, Michel AM, Baranov PV.

Nucleic Acids Res. 2019 Jan 8;47(D1):D847-D852. doi: 10.1093/nar/gky842.

3.

TASEP modelling provides a parsimonious explanation for the ability of a single uORF to derepress translation during the integrated stress response.

Andreev DE, Arnold M, Kiniry SJ, Loughran G, Michel AM, Rachinskii D, Baranov PV.

Elife. 2018 Jun 22;7. pii: e32563. doi: 10.7554/eLife.32563.

4.

The GWIPS-viz Browser.

Kiniry SJ, Michel AM, Baranov PV.

Curr Protoc Bioinformatics. 2018 Jun;62(1):e50. doi: 10.1002/cpbi.50. Epub 2018 May 16.

PMID:
29927076
5.

AMD1 mRNA employs ribosome stalling as a mechanism for molecular memory formation.

Yordanova MM, Loughran G, Zhdanov AV, Mariotti M, Kiniry SJ, O'Connor PBF, Andreev DE, Tzani I, Saffert P, Michel AM, Gladyshev VN, Papkovsky DB, Atkins JF, Baranov PV.

Nature. 2018 Jan 18;553(7688):356-360. doi: 10.1038/nature25174. Epub 2018 Jan 3.

PMID:
29310120
6.

GWIPS-viz: 2018 update.

Michel AM, Kiniry SJ, O'Connor PBF, Mullan JP, Baranov PV.

Nucleic Acids Res. 2018 Jan 4;46(D1):D823-D830. doi: 10.1093/nar/gkx790.

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