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Items: 20

1.

Dietary partitioning promotes the coexistence of planktivorous species on coral reefs.

Leray M, Alldredge AL, Yang JY, Meyer CP, Holbrook SJ, Schmitt RJ, Knowlton N, Brooks AJ.

Mol Ecol. 2019 Apr 1. doi: 10.1111/mec.15090. [Epub ahead of print]

PMID:
30933383
2.

Five new records of marine shrimps (Decapoda: Caridea, Stenopodidea) from the Caribbean coast of Panama.

Pachelle PPG, Leray M, Anker A, Lasley R.

Zootaxa. 2018 Jun 20;4438(1):128-136. doi: 10.11646/zootaxa.4438.1.5.

PMID:
30313159
3.

Before platelets: the production of platelet-activating factor during growth and stress in a basal marine organism.

Galtier d'Auriac I, Quinn RA, Maughan H, Nothias LF, Little M, Kapono CA, Cobian A, Reyes BT, Green K, Quistad SD, Leray M, Smith JE, Dorrestein PC, Rohwer F, Deheyn DD, Hartmann AC.

Proc Biol Sci. 2018 Aug 15;285(1884). pii: 20181307. doi: 10.1098/rspb.2018.1307.

4.

MIDORI server: a webserver for taxonomic assignment of unknown metazoan mitochondrial-encoded sequences using a curated database.

Leray M, Ho SL, Lin IJ, Machida RJ.

Bioinformatics. 2018 Nov 1;34(21):3753-3754. doi: 10.1093/bioinformatics/bty454.

5.

The importance of standardization for biodiversity comparisons: A case study using autonomous reef monitoring structures (ARMS) and metabarcoding to measure cryptic diversity on Mo'orea coral reefs, French Polynesia.

Ransome E, Geller JB, Timmers M, Leray M, Mahardini A, Sembiring A, Collins AG, Meyer CP.

PLoS One. 2017 Apr 21;12(4):e0175066. doi: 10.1371/journal.pone.0175066. eCollection 2017.

6.

Random sampling causes the low reproducibility of rare eukaryotic OTUs in Illumina COI metabarcoding.

Leray M, Knowlton N.

PeerJ. 2017 Mar 22;5:e3006. doi: 10.7717/peerj.3006. eCollection 2017.

7.

Metazoan mitochondrial gene sequence reference datasets for taxonomic assignment of environmental samples.

Machida RJ, Leray M, Ho SL, Knowlton N.

Sci Data. 2017 Mar 14;4:170027. doi: 10.1038/sdata.2017.27.

8.

Deep COI sequencing of standardized benthic samples unveils overlooked diversity of Jordanian coral reefs in the northern Red Sea.

Al-Rshaidat MM, Snider A, Rosebraugh S, Devine AM, Devine TD, Plaisance L, Knowlton N, Leray M.

Genome. 2016 Sep;59(9):724-37. doi: 10.1139/gen-2015-0208. Epub 2016 Jul 19.

9.

Censusing marine eukaryotic diversity in the twenty-first century.

Leray M, Knowlton N.

Philos Trans R Soc Lond B Biol Sci. 2016 Sep 5;371(1702). pii: 20150331. doi: 10.1098/rstb.2015.0331. Review.

10.

Visualizing Patterns of Marine Eukaryotic Diversity from Metabarcoding Data Using QIIME.

Leray M, Knowlton N.

Methods Mol Biol. 2016;1452:219-35. doi: 10.1007/978-1-4939-3774-5_15.

PMID:
27460381
11.

Preparation of Amplicon Libraries for Metabarcoding of Marine Eukaryotes Using Illumina MiSeq: The Adapter Ligation Method.

Leray M, Haenel Q, Bourlat SJ.

Methods Mol Biol. 2016;1452:209-18. doi: 10.1007/978-1-4939-3774-5_14.

PMID:
27460380
12.

Preparation of Amplicon Libraries for Metabarcoding of Marine Eukaryotes Using Illumina MiSeq: The Dual-PCR Method.

Bourlat SJ, Haenel Q, Finnman J, Leray M.

Methods Mol Biol. 2016;1452:197-207. doi: 10.1007/978-1-4939-3774-5_13.

PMID:
27460379
13.
14.

DNA barcoding and metabarcoding of standardized samples reveal patterns of marine benthic diversity.

Leray M, Knowlton N.

Proc Natl Acad Sci U S A. 2015 Feb 17;112(7):2076-81. doi: 10.1073/pnas.1424997112. Epub 2015 Feb 2.

15.

A new versatile primer set targeting a short fragment of the mitochondrial COI region for metabarcoding metazoan diversity: application for characterizing coral reef fish gut contents.

Leray M, Yang JY, Meyer CP, Mills SC, Agudelo N, Ranwez V, Boehm JT, Machida RJ.

Front Zool. 2013 Jun 14;10:34. doi: 10.1186/1742-9994-10-34. eCollection 2013.

16.
17.

Acanthaster planci outbreak: decline in coral health, coral size structure modification and consequences for obligate decapod assemblages.

Leray M, BĂ©raud M, Anker A, Chancerelle Y, Mills SC.

PLoS One. 2012;7(4):e35456. doi: 10.1371/journal.pone.0035456. Epub 2012 Apr 17.

18.

Housekeeping mutualisms: do more symbionts facilitate host performance?

Stier AC, Gil MA, McKeon CS, Lemer S, Leray M, Mills SC, Osenberg CW.

PLoS One. 2012;7(4):e32079. doi: 10.1371/journal.pone.0032079. Epub 2012 Apr 16.

19.

Allopatric divergence and speciation in coral reef fish: the three-spot dascyllus, Dascyllus trimaculatus, species complex.

Leray M, Beldade R, Holbrook SJ, Schmitt RJ, Planes S, Bernardi G.

Evolution. 2010 May;64(5):1218-30. doi: 10.1111/j.1558-5646.2009.00917.x. Epub 2009 Dec 4.

PMID:
20002167
20.

Isolation and characterization of 13 polymorphic nuclear microsatellite primers for the widespread Indo-Pacific three-spot damselfish, Dascyllus trimaculatus, and closely related D. auripinnis.

Leray M, Beldade R, Holbrook SJ, Schmitt RJ, Planes S, Bernardi G.

Mol Ecol Resour. 2009 Jan;9(1):213-5. doi: 10.1111/j.1755-0998.2008.02380.x. Epub 2008 Oct 22.

PMID:
21564606

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