Format
Sort by
Items per page

Send to

Choose Destination

Search results

Items: 1 to 20 of 144

1.

Volatile Evolution of Long Non-Coding RNA Repertoire in Retinal Pigment Epithelium: Insights from Comparison of Bovine and Human RNA Expression Profiles.

Postnikova OA, Rogozin IB, Samuel W, Nudelman G, Babenko VN, Poliakov E, Redmond TM.

Genes (Basel). 2019 Mar 8;10(3). pii: E205. doi: 10.3390/genes10030205.

2.

Nucleotide Weight Matrices Reveal Ubiquitous Mutational Footprints of AID/APOBEC Deaminases in Human Cancer Genomes.

Rogozin IB, Roche-Lima A, Lada AG, Belinky F, Sidorenko IA, Glazko GV, Babenko VN, Cooper DN, Pavlov YI.

Cancers (Basel). 2019 Feb 12;11(2). pii: E211. doi: 10.3390/cancers11020211.

3.

Aberrant RNA splicing is the major pathogenic effect in a knock-in mouse model of the dominantly inherited c.1430A>G human RPE65 mutation.

Li Y, Furhang R, Ray A, Duncan T, Soucy J, Mahdi R, Chaitankar V, Gieser L, Poliakov E, Qian H, Liu P, Dong L, Rogozin IB, Redmond TM.

Hum Mutat. 2019 Apr;40(4):426-443. doi: 10.1002/humu.23706. Epub 2019 Jan 25.

PMID:
30628748
4.

Genome-Wide Changes in Protein Translation Efficiency Are Associated with Autism.

Rogozin IB, Gertz EM, Baranov PV, Poliakov E, Schaffer AA.

Genome Biol Evol. 2018 Aug 1;10(8):1902-1919. doi: 10.1093/gbe/evy146.

5.

Purifying and positive selection in the evolution of stop codons.

Belinky F, Babenko VN, Rogozin IB, Koonin EV.

Sci Rep. 2018 Jun 18;8(1):9260. doi: 10.1038/s41598-018-27570-3.

6.

The Presence of Genotoxic and/or Pro-inflammatory Bacterial Genes in Gut Metagenomic Databases and Their Possible Link With Inflammatory Bowel Diseases.

Roche-Lima A, Carrasquillo-Carrión K, Gómez-Moreno R, Cruz JM, Velázquez-Morales DM, Rogozin IB, Baerga-Ortiz A.

Front Genet. 2018 Apr 10;9:116. doi: 10.3389/fgene.2018.00116. eCollection 2018.

7.

Diverse roles of RAD18 and Y-family DNA polymerases in tumorigenesis.

Yang Y, Gao Y, Zlatanou A, Tateishi S, Yurchenko V, Rogozin IB, Vaziri C.

Cell Cycle. 2018;17(7):833-843. doi: 10.1080/15384101.2018.1456296. Epub 2018 May 8.

8.

Recombination Is Responsible for the Increased Recovery of Drug-Resistant Mutants with Hypermutated Genomes in Resting Yeast Diploids Expressing APOBEC Deaminases.

Lada AG, Stepchenkova EI, Zhuk AS, Kliver SF, Rogozin IB, Polev DE, Dhar A, Pavlov YI.

Front Genet. 2017 Dec 12;8:202. doi: 10.3389/fgene.2017.00202. eCollection 2017.

9.

Viral discovery and diversity in trypanosomatid protozoa with a focus on relatives of the human parasite Leishmania.

Grybchuk D, Akopyants NS, Kostygov AY, Konovalovas A, Lye LF, Dobson DE, Zangger H, Fasel N, Butenko A, Frolov AO, Votýpka J, d'Avila-Levy CM, Kulich P, Moravcová J, Plevka P, Rogozin IB, Serva S, Lukeš J, Beverley SM, Yurchenko V.

Proc Natl Acad Sci U S A. 2018 Jan 16;115(3):E506-E515. doi: 10.1073/pnas.1717806115. Epub 2017 Dec 28.

10.

DNA polymerase η mutational signatures are found in a variety of different types of cancer.

Rogozin IB, Goncearenco A, Lada AG, De S, Yurchenko V, Nudelman G, Panchenko AR, Cooper DN, Pavlov YI.

Cell Cycle. 2018;17(3):348-355. doi: 10.1080/15384101.2017.1404208. Epub 2018 Feb 15.

11.

Involvement of DNA mismatch repair in the maintenance of heterochromatic DNA stability in Saccharomyces cerevisiae.

Dahal BK, Kadyrova LY, Delfino KR, Rogozin IB, Gujar V, Lobachev KS, Kadyrov FA.

PLoS Genet. 2017 Oct 25;13(10):e1007074. doi: 10.1371/journal.pgen.1007074. eCollection 2017 Oct.

12.

Phylogenetic analysis of the metazoan carotenoid oxygenase superfamily: a new ancestral gene assemblage of BCO-like (BCOL) proteins.

Poliakov E, Soucy J, Gentleman S, Rogozin IB, Redmond TM.

Sci Rep. 2017 Oct 16;7(1):13192. doi: 10.1038/s41598-017-13521-x.

13.

Selection on start codons in prokaryotes and potential compensatory nucleotide substitutions.

Belinky F, Rogozin IB, Koonin EV.

Sci Rep. 2017 Sep 29;7(1):12422. doi: 10.1038/s41598-017-12619-6.

14.

Mutational signatures and mutable motifs in cancer genomes.

Rogozin IB, Pavlov YI, Goncearenco A, De S, Lada AG, Poliakov E, Panchenko AR, Cooper DN.

Brief Bioinform. 2018 Nov 27;19(6):1085-1101. doi: 10.1093/bib/bbx049.

15.

Exploring background mutational processes to decipher cancer genetic heterogeneity.

Goncearenco A, Rager SL, Li M, Sang QX, Rogozin IB, Panchenko AR.

Nucleic Acids Res. 2017 Jul 3;45(W1):W514-W522. doi: 10.1093/nar/gkx367.

16.

Activation induced deaminase mutational signature overlaps with CpG methylation sites in follicular lymphoma and other cancers.

Rogozin IB, Lada AG, Goncearenco A, Green MR, De S, Nudelman G, Panchenko AR, Koonin EV, Pavlov YI.

Sci Rep. 2016 Dec 7;6:38133. doi: 10.1038/srep38133.

17.

Evolutionary switches between two serine codon sets are driven by selection.

Rogozin IB, Belinky F, Pavlenko V, Shabalina SA, Kristensen DM, Koonin EV.

Proc Natl Acad Sci U S A. 2016 Nov 15;113(46):13109-13113. Epub 2016 Oct 31.

18.

Conservation of the Exon-Intron Structure of Long Intergenic Non-Coding RNA Genes in Eutherian Mammals.

Chernikova D, Managadze D, Glazko GV, Makalowski W, Rogozin IB.

Life (Basel). 2016 Jul 15;6(3). pii: E27. doi: 10.3390/life6030027.

19.

Germline viral "fossils" guide in silico reconstruction of a mid-Cenozoic era marsupial adeno-associated virus.

Smith RH, Hallwirth CV, Westerman M, Hetherington NA, Tseng YS, Cecchini S, Virag T, Ziegler ML, Rogozin IB, Koonin EV, Agbandje-McKenna M, Kotin RM, Alexander IE.

Sci Rep. 2016 Jul 5;6:28965. doi: 10.1038/srep28965.

20.

Transposable Element Insertions in Long Intergenic Non-Coding RNA Genes.

Kannan S, Chernikova D, Rogozin IB, Poliakov E, Managadze D, Koonin EV, Milanesi L.

Front Bioeng Biotechnol. 2015 Jun 9;3:71. doi: 10.3389/fbioe.2015.00071. eCollection 2015.

Supplemental Content

Loading ...
Support Center