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Items: 1 to 20 of 34

1.

Gene co-expression network analysis identifies trait-related modules in Arabidopsis thaliana.

Liu W, Lin L, Zhang Z, Liu S, Gao K, Lv Y, Tao H, He H.

Planta. 2019 May;249(5):1487-1501. doi: 10.1007/s00425-019-03102-9. Epub 2019 Jan 30.

PMID:
30701323
2.

Differential Expression Proteins Contribute to Race-Specific Resistant Ability in Rice (Oryza sativa L.).

Ma S, Lin S, Wang M, Zou Y, Tao H, Liu W, Zhang L, Liang K, Ai Y, He H.

Plants (Basel). 2019 Jan 23;8(2). pii: E29. doi: 10.3390/plants8020029.

3.

Revisiting Connectivity Map from a gene co-expression network analysis.

Liu W, Tu W, Li L, Liu Y, Wang S, Li L, Tao H, He H.

Exp Ther Med. 2018 Aug;16(2):493-500. doi: 10.3892/etm.2018.6275. Epub 2018 Jun 8.

4.

Role of COL6A3 in colorectal cancer.

Liu W, Li L, Ye H, Tao H, He H.

Oncol Rep. 2018 Jun;39(6):2527-2536. doi: 10.3892/or.2018.6331. Epub 2018 Mar 23.

5.

Construction and Analysis of Gene Co-Expression Networks in Escherichia coli.

Liu W, Li L, Long X, You W, Zhong Y, Wang M, Tao H, Lin S, He H.

Cells. 2018 Mar 8;7(3). pii: E19. doi: 10.3390/cells7030019.

6.

Prediction of protein-protein interactions between fungus (Magnaporthe grisea) and rice (Oryza sativa L.).

Ma S, Song Q, Tao H, Harrison A, Wang S, Liu W, Lin S, Zhang Z, Ai Y, He H.

Brief Bioinform. 2019 Mar 22;20(2):448-456. doi: 10.1093/bib/bbx132.

PMID:
29040362
7.

Critical assessment and performance improvement of plant-pathogen protein-protein interaction prediction methods.

Yang S, Li H, He H, Zhou Y, Zhang Z.

Brief Bioinform. 2019 Jan 18;20(1):274-287. doi: 10.1093/bib/bbx123.

PMID:
29028906
8.

From Saccharomyces cerevisiae to human: The important gene co-expression modules.

Liu W, Li L, Ye H, Chen H, Shen W, Zhong Y, Tian T, He H.

Biomed Rep. 2017 Aug;7(2):153-158. doi: 10.3892/br.2017.941. Epub 2017 Jul 6.

9.

Impact of SNPs on Protein Phosphorylation Status in Rice (Oryza sativa L.).

Lin S, Chen L, Tao H, Huang J, Xu C, Li L, Ma S, Tian T, Liu W, Xue L, Ai Y, He H.

Int J Mol Sci. 2016 Nov 11;17(11). pii: E1738.

10.

Classification of the fragrant styles and evaluation of the aromatic quality of flue-cured tobacco leaves by machine-learning methods.

Gu L, Xue L, Song Q, Wang F, He H, Zhang Z.

J Bioinform Comput Biol. 2016 Dec;14(6):1650033. doi: 10.1142/S0219720016500335. Epub 2016 Sep 9.

PMID:
27696927
11.

Prediction and identification of the effectors of heterotrimeric G proteins in rice (Oryza sativa L.).

Li K, Xu C, Huang J, Liu W, Zhang L, Wan W, Tao H, Li L, Lin S, Harrison A, He H.

Brief Bioinform. 2017 Mar 1;18(2):270-278. doi: 10.1093/bib/bbw021.

PMID:
26970777
12.

Rice_Phospho 1.0: a new rice-specific SVM predictor for protein phosphorylation sites.

Lin S, Song Q, Tao H, Wang W, Wan W, Huang J, Xu C, Chebii V, Kitony J, Que S, Harrison A, He H.

Sci Rep. 2015 Jul 7;5:11940. doi: 10.1038/srep11940.

13.

Genome-wide identification of heat shock proteins (Hsps) and Hsp interactors in rice: Hsp70s as a case study.

Wang Y, Lin S, Song Q, Li K, Tao H, Huang J, Chen X, Que S, He H.

BMC Genomics. 2014 May 7;15:344. doi: 10.1186/1471-2164-15-344.

14.

Expression and interaction of small heat shock proteins (sHsps) in rice in response to heat stress.

Chen X, Lin S, Liu Q, Huang J, Zhang W, Lin J, Wang Y, Ke Y, He H.

Biochim Biophys Acta. 2014 Apr;1844(4):818-28. doi: 10.1016/j.bbapap.2014.02.010. Epub 2014 Feb 22.

PMID:
24566471
15.

PhosphoRice: a meta-predictor of rice-specific phosphorylation sites.

Que S, Li K, Chen M, Wang Y, Yang Q, Zhang W, Zhang B, Xiong B, He H.

Plant Methods. 2012 Feb 3;8:5. doi: 10.1186/1746-4811-8-5.

16.

Phosphoproteins regulated by heat stress in rice leaves.

Chen X, Zhang W, Zhang B, Zhou J, Wang Y, Yang Q, Ke Y, He H.

Proteome Sci. 2011 Jun 30;9:37. doi: 10.1186/1477-5956-9-37.

17.

Evaluation of protein phosphorylation site predictors.

Que S, Wang Y, Chen P, Tang YR, Zhang Z, He H.

Protein Pept Lett. 2010 Jan;17(1):64-9.

PMID:
19508198
18.

Differential regulation of proteins and phosphoproteins in rice under drought stress.

Ke Y, Han G, He H, Li J.

Biochem Biophys Res Commun. 2009 Jan 30;379(1):133-8. doi: 10.1016/j.bbrc.2008.12.067. Epub 2008 Dec 25.

PMID:
19103168
19.

Proteomic analysis of phosphoproteins regulated by abscisic acid in rice leaves.

He H, Li J.

Biochem Biophys Res Commun. 2008 Jul 11;371(4):883-8. doi: 10.1016/j.bbrc.2008.05.001. Epub 2008 May 9.

PMID:
18468508
20.

[Allelopathic potential and physiological mechanism of Oryza sativa L. under phosphorus deficiency stress].

He H, Liang Y, Chen L, Zhuang C, Ke Y, Liang K, Lin W.

Ying Yong Sheng Tai Xue Bao. 2006 Nov;17(11):2070-4. Chinese.

PMID:
17269328

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