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Items: 19

1.

Predominance and high diversity of genes associated to denitrification in metagenomes of subantarctic coastal sediments exposed to urban pollution.

Calderoli PA, Espínola FJ, Dionisi HM, Gil MN, Jansson JK, Lozada M.

PLoS One. 2018 Nov 29;13(11):e0207606. doi: 10.1371/journal.pone.0207606. eCollection 2018.

2.

A communal catalogue reveals Earth's multiscale microbial diversity.

Thompson LR, Sanders JG, McDonald D, Amir A, Ladau J, Locey KJ, Prill RJ, Tripathi A, Gibbons SM, Ackermann G, Navas-Molina JA, Janssen S, Kopylova E, Vázquez-Baeza Y, González A, Morton JT, Mirarab S, Zech Xu Z, Jiang L, Haroon MF, Kanbar J, Zhu Q, Jin Song S, Kosciolek T, Bokulich NA, Lefler J, Brislawn CJ, Humphrey G, Owens SM, Hampton-Marcell J, Berg-Lyons D, McKenzie V, Fierer N, Fuhrman JA, Clauset A, Stevens RL, Shade A, Pollard KS, Goodwin KD, Jansson JK, Gilbert JA, Knight R; Earth Microbiome Project Consortium.

Nature. 2017 Nov 23;551(7681):457-463. doi: 10.1038/nature24621. Epub 2017 Nov 1.

3.

Metagenomic Analysis of Subtidal Sediments from Polar and Subpolar Coastal Environments Highlights the Relevance of Anaerobic Hydrocarbon Degradation Processes.

Espínola F, Dionisi HM, Borglin S, Brislawn CJ, Jansson JK, Mac Cormack WP, Carroll J, Sjöling S, Lozada M.

Microb Ecol. 2018 Jan;75(1):123-139. doi: 10.1007/s00248-017-1028-5. Epub 2017 Jul 12.

PMID:
28702706
4.

Prospecting Biotechnologically-Relevant Monooxygenases from Cold Sediment Metagenomes: An In Silico Approach.

Musumeci MA, Lozada M, Rial DV, Mac Cormack WP, Jansson JK, Sjöling S, Carroll J, Dionisi HM.

Mar Drugs. 2017 Apr 9;15(4). pii: E114. doi: 10.3390/md15040114.

5.

Metagenomics unveils the attributes of the alginolytic guilds of sediments from four distant cold coastal environments.

Matos MN, Lozada M, Anselmino LE, Musumeci MA, Henrissat B, Jansson JK, Mac Cormack WP, Carroll J, Sjöling S, Lundgren L, Dionisi HM.

Environ Microbiol. 2016 Dec;18(12):4471-4484. doi: 10.1111/1462-2920.13433. Epub 2016 Jul 18.

PMID:
27348213
6.

Diverse Bacterial Groups Contribute to the Alkane Degradation Potential of Chronically Polluted Subantarctic Coastal Sediments.

Guibert LM, Loviso CL, Borglin S, Jansson JK, Dionisi HM, Lozada M.

Microb Ecol. 2016 Jan;71(1):100-12. doi: 10.1007/s00248-015-0698-0. Epub 2015 Nov 7.

PMID:
26547568
7.

The bacterial community structure of hydrocarbon-polluted marine environments as the basis for the definition of an ecological index of hydrocarbon exposure.

Lozada M, Marcos MS, Commendatore MG, Gil MN, Dionisi HM.

Microbes Environ. 2014 Sep 17;29(3):269-76. Epub 2014 Jun 24.

8.

Bioprospection of marine microorganisms: potential and challenges for Argentina.

Dionisi HM, Lozada M, Olivera NL.

Rev Argent Microbiol. 2012 Apr-Jun;44(2):122-32. Review.

PMID:
22997772
9.

Bioprospection of marine microorganisms: biotechnological applications and methods.

Dionisi HM, Lozada M, Olivera NL.

Rev Argent Microbiol. 2012 Jan-Mar;44(1):49-60. doi: 10.1590/S0325-75412012000100010. Review.

PMID:
22610288
10.

Alkane biodegradation genes from chronically polluted subantarctic coastal sediments and their shifts in response to oil exposure.

Guibert LM, Loviso CL, Marcos MS, Commendatore MG, Dionisi HM, Lozada M.

Microb Ecol. 2012 Oct;64(3):605-16. Epub 2012 May 12.

PMID:
22580956
11.

Abundance, dynamics, and biogeographic distribution of seven polycyclic aromatic hydrocarbon dioxygenase gene variants in coastal sediments of Patagonia.

Marcos MS, Lozada M, Di Marzio WD, Dionisi HM.

Appl Environ Microbiol. 2012 Mar;78(5):1589-92. doi: 10.1128/AEM.06929-11. Epub 2012 Jan 6.

12.

Isolation and characterization of biosurfactant-producing Alcanivorax strains: hydrocarbon accession strategies and alkane hydroxylase gene analysis.

Olivera NL, Nievas ML, Lozada M, Del Prado G, Dionisi HM, Siñeriz F.

Res Microbiol. 2009 Jan-Feb;160(1):19-26. doi: 10.1016/j.resmic.2008.09.011. Epub 2008 Oct 18.

PMID:
18983915
13.

Novel aromatic ring-hydroxylating dioxygenase genes from coastal marine sediments of Patagonia.

Lozada M, Riva Mercadal JP, Guerrero LD, Di Marzio WD, Ferrero MA, Dionisi HM.

BMC Microbiol. 2008 Mar 25;8:50. doi: 10.1186/1471-2180-8-50.

14.

Codon optimization of bacterial luciferase (lux) for expression in mammalian cells.

Patterson SS, Dionisi HM, Gupta RK, Sayler GS.

J Ind Microbiol Biotechnol. 2005 Mar;32(3):115-23. Epub 2005 Mar 11.

PMID:
15761767
15.
16.

Evaluation of a plasmid-based 16S-23S rDNA intergenic spacer region array for analysis of microbial diversity in industrial wastewater.

Cook KL, Layton AC, Dionisi HM, Fleming JT, Sayler GS.

J Microbiol Methods. 2004 Apr;57(1):79-93.

PMID:
15003691
17.

Power analysis for real-time PCR quantification of genes in activated sludge and analysis of the variability introduced by DNA extraction.

Dionisi HM, Harms G, Layton AC, Gregory IR, Parker J, Hawkins SA, Robinson KG, Sayler GS.

Appl Environ Microbiol. 2003 Nov;69(11):6597-604.

18.

Real-time PCR quantification of nitrifying bacteria in a municipal wastewater treatment plant.

Harms G, Layton AC, Dionisi HM, Gregory IR, Garrett VM, Hawkins SA, Robinson KG, Sayler GS.

Environ Sci Technol. 2003 Jan 15;37(2):343-51.

PMID:
12564907
19.

Quantification of Nitrosomonas oligotropha-like ammonia-oxidizing bacteria and Nitrospira spp. from full-scale wastewater treatment plants by competitive PCR.

Dionisi HM, Layton AC, Harms G, Gregory IR, Robinson KG, Sayler GS.

Appl Environ Microbiol. 2002 Jan;68(1):245-53.

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