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Items: 1 to 20 of 27

1.

Mitotic Recombination and Rapid Genome Evolution in the Invasive Forest Pathogen Phytophthora ramorum.

Dale AL, Feau N, Everhart SE, Dhillon B, Wong B, Sheppard J, Bilodeau GJ, Brar A, Tabima JF, Shen D, Brasier CM, Tyler BM, Grünwald NJ, Hamelin RC.

MBio. 2019 Mar 12;10(2). pii: e02452-18. doi: 10.1128/mBio.02452-18.

2.

Recovery of Fungal Cells from Air Samples: a Tale of Loss and Gain.

Mbareche H, Veillette M, Teertstra W, Kegel W, Bilodeau GJ, Wösten HAB, Duchaine C.

Appl Environ Microbiol. 2019 Apr 18;85(9). pii: e02941-18. doi: 10.1128/AEM.02941-18. Print 2019 May 1.

PMID:
30824432
3.

High-Throughput Sequencing to Investigate Phytopathogenic Fungal Propagules Caught in Baited Insect Traps.

Tremblay ÉD, Kimoto T, Bérubé JA, Bilodeau GJ.

J Fungi (Basel). 2019 Feb 12;5(1). pii: E15. doi: 10.3390/jof5010015.

4.

An amplicon-based sequencing approach for the study of aeromycology.

Mbareche H, Veillette M, Bilodeau GJ, Duchaine C.

J Xenobiot. 2018 Oct 29;8(1):7810. doi: 10.4081/xeno.2018.7810. eCollection 2018 Oct 20. No abstract available.

5.

An Overview of Canadian Research Activities on Diseases Caused by Phytophthora ramorum: Results, Progress, and Challenges.

Shamoun SF, Rioux D, Callan B, James D, Hamelin RC, Bilodeau GJ, Elliott M, Lévesque CA, Becker E, McKenney D, Pedlar J, Bailey K, Brière SC, Niquidet K, Allen E.

Plant Dis. 2018 Jul;102(7):1218-1233. doi: 10.1094/PDIS-11-17-1730-FE. Epub 2018 Jun 7. Review.

PMID:
30673582
6.

Advances in Diagnostics of Downy Mildews: Lessons Learned from Other Oomycetes and Future Challenges.

Crandall SG, Rahman A, Quesada-Ocampo LM, Martin FN, Bilodeau GJ, Miles TD.

Plant Dis. 2018 Feb;102(2):265-275. doi: 10.1094/PDIS-09-17-1455-FE. Epub 2018 Jan 5. Review.

PMID:
30673522
7.

Fungal aerosols at dairy farms using molecular and culture techniques.

Mbareche H, Veillette M, Bilodeau GJ, Duchaine C.

Sci Total Environ. 2019 Feb 25;653:253-263. doi: 10.1016/j.scitotenv.2018.10.345. Epub 2018 Oct 26.

PMID:
30412870
8.

Bioaerosol Sampler Choice Should Consider Efficiency and Ability of Samplers To Cover Microbial Diversity.

Mbareche H, Veillette M, Bilodeau GJ, Duchaine C.

Appl Environ Microbiol. 2018 Nov 15;84(23). pii: e01589-18. doi: 10.1128/AEM.01589-18. Print 2018 Dec 1.

9.

Fungal bioaerosols in biomethanization facilities.

Mbareche H, Veillette M, Dubuis MÈ, Bakhiyi B, Marchand G, Zayed J, Lavoie J, Bilodeau GJ, Duchaine C.

J Air Waste Manag Assoc. 2018 Nov;68(11):1198-1210. doi: 10.1080/10962247.2018.1492472. Epub 2018 Aug 27.

PMID:
29939829
10.

Screening for Exotic Forest Pathogens to Increase Survey Capacity Using Metagenomics.

Tremblay ÉD, Duceppe MO, Bérubé JA, Kimoto T, Lemieux C, Bilodeau GJ.

Phytopathology. 2018 Dec;108(12):1509-1521. doi: 10.1094/PHYTO-02-18-0028-R. Epub 2018 Nov 2.

PMID:
29923801
11.

Metaxa2 Database Builder: enabling taxonomic identification from metagenomic or metabarcoding data using any genetic marker.

Bengtsson-Palme J, Richardson RT, Meola M, Wurzbacher C, Tremblay ÉD, Thorell K, Kanger K, Eriksson KM, Bilodeau GJ, Johnson RM, Hartmann M, Nilsson RH.

Bioinformatics. 2018 Dec 1;34(23):4027-4033. doi: 10.1093/bioinformatics/bty482.

12.

Genome-Enhanced Detection and Identification (GEDI) of plant pathogens.

Feau N, Beauseigle S, Bergeron MJ, Bilodeau GJ, Birol I, Cervantes-Arango S, Dhillon B, Dale AL, Herath P, Jones SJM, Lamarche J, Ojeda DI, Sakalidis ML, Taylor G, Tsui CKM, Uzunovic A, Yueh H, Tanguay P, Hamelin RC.

PeerJ. 2018 Feb 22;6:e4392. doi: 10.7717/peerj.4392. eCollection 2018.

13.

Development of Real-Time Isothermal Amplification Assays for On-Site Detection of Phytophthora infestans in Potato Leaves.

Si Ammour M, Bilodeau GJ, Tremblay DM, Van der Heyden H, Yaseen T, Varvaro L, Carisse O.

Plant Dis. 2017 Jul;101(7):1269-1277. doi: 10.1094/PDIS-12-16-1780-RE. Epub 2017 May 3.

PMID:
30682973
14.

Systematic Development of Phytophthora Species-Specific Mitochondrial Diagnostic Markers for Economically Important Members of the Genus.

Miles TD, Martin FN, Robideau GP, Bilodeau GJ, Coffey MD.

Plant Dis. 2017 Jul;101(7):1162-1170. doi: 10.1094/PDIS-09-16-1224-RE. Epub 2017 Apr 19.

PMID:
30682972
15.

A next generation sequencing approach with a suitable bioinformatics workflow to study fungal diversity in bioaerosols released from two different types of composting plants.

Mbareche H, Veillette M, Bonifait L, Dubuis ME, Benard Y, Marchand G, Bilodeau GJ, Duchaine C.

Sci Total Environ. 2017 Dec 1;601-602:1306-1314. doi: 10.1016/j.scitotenv.2017.05.235. Epub 2017 Jun 9.

PMID:
28605849
16.

Development and Validation of Polymorphic Microsatellite Loci for the NA2 Lineage of Phytophthora ramorum from Whole Genome Sequence Data.

Gagnon MC, Feau N, Dale AL, Dhillon B, Hamelin RC, Brasier CM, Grünwald NJ, Brière SC, Bilodeau GJ.

Plant Dis. 2017 May;101(5):666-673. doi: 10.1094/PDIS-11-16-1586-RE. Epub 2017 Mar 16.

PMID:
30678572
17.

Genome sequences of six Phytophthora species threatening forest ecosystems.

Feau N, Taylor G, Dale AL, Dhillon B, Bilodeau GJ, Birol I, Jones SJ, Hamelin RC.

Genom Data. 2016 Oct 3;10:85-88. eCollection 2016 Dec.

18.

Genome Analysis and Development of a Multiplex TaqMan Real-Time PCR for Specific Identification and Detection of Clavibacter michiganensis subsp. nebraskensis.

Tambong JT, Xu R, Daayf F, Brière S, Bilodeau GJ, Tropiano R, Hartke A, Reid LM, Cott M, Cote T, Agarkova I.

Phytopathology. 2016 Dec;106(12):1473-1485. Epub 2016 Oct 4.

19.

Identification of the Dominant Genotypes of Phytophthora infestans in Canada Using Real-Time PCR with ASO-PCR Assays.

Gagnon MC, Kawchuk L, Tremblay DM, Carisse O, Danies G, Fry WE, Lévesque CA, Bilodeau GJ.

Plant Dis. 2016 Jul;100(7):1482-1491. doi: 10.1094/PDIS-07-15-0763-RE. Epub 2016 Mar 7.

PMID:
30686184
20.

Development of Polymorphic Microsatellite Loci for Potato Wart from Next-Generation Sequence Data.

Gagnon MC, van der Lee TA, Bonants PJ, Smith DS, Li X, Lévesque CA, Bilodeau GJ.

Phytopathology. 2016 Jun;106(6):636-44. doi: 10.1094/PHYTO-12-15-0317-R. Epub 2016 Apr 8.

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