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Items: 16

1.

Unipept 4.0: Functional Analysis of Metaproteome Data.

Gurdeep Singh R, Tanca A, Palomba A, Van der Jeugt F, Verschaffelt P, Uzzau S, Martens L, Dawyndt P, Mesuere B.

J Proteome Res. 2019 Feb 1;18(2):606-615. doi: 10.1021/acs.jproteome.8b00716. Epub 2018 Dec 4.

PMID:
30465426
2.

Clostridial Butyrate Biosynthesis Enzymes Are Significantly Depleted in the Gut Microbiota of Nonobese Diabetic Mice.

Tanca A, Palomba A, Fraumene C, Manghina V, Silverman M, Uzzau S.

mSphere. 2018 Oct 24;3(5). pii: e00492-18. doi: 10.1128/mSphere.00492-18.

3.

Caloric restriction promotes functional changes involving short-chain fatty acid biosynthesis in the rat gut microbiota.

Tanca A, Abbondio M, Palomba A, Fraumene C, Marongiu F, Serra M, Pagnozzi D, Laconi E, Uzzau S.

Sci Rep. 2018 Oct 3;8(1):14778. doi: 10.1038/s41598-018-33100-y.

4.

The Sarda Sheep Host Fecal Proteome.

Palomba A, Tanca A, Addis MF, Pagnozzi D, Uzzau S.

Proteomics. 2018 Feb;18(3-4). doi: 10.1002/pmic.201700272. Epub 2018 Feb 6.

PMID:
29328543
5.

Multi-Omic Biogeography of the Gastrointestinal Microbiota of a Pre-Weaned Lamb.

Palomba A, Tanca A, Fraumene C, Abbondio M, Fancello F, Atzori AS, Uzzau S.

Proteomes. 2017 Dec 18;5(4). pii: E36. doi: 10.3390/proteomes5040036.

6.

Caloric restriction promotes rapid expansion and long-lasting increase of Lactobacillus in the rat fecal microbiota.

Fraumene C, Manghina V, Cadoni E, Marongiu F, Abbondio M, Serra M, Palomba A, Tanca A, Laconi E, Uzzau S.

Gut Microbes. 2018 Mar 4;9(2):104-114. doi: 10.1080/19490976.2017.1371894. Epub 2017 Sep 21.

7.

Protective major histocompatibility complex allele prevents type 1 diabetes by shaping the intestinal microbiota early in ontogeny.

Silverman M, Kua L, Tanca A, Pala M, Palomba A, Tanes C, Bittinger K, Uzzau S, Benoist C, Mathis D.

Proc Natl Acad Sci U S A. 2017 Sep 5;114(36):9671-9676. doi: 10.1073/pnas.1712280114. Epub 2017 Aug 22.

8.

Potential and active functions in the gut microbiota of a healthy human cohort.

Tanca A, Abbondio M, Palomba A, Fraumene C, Manghina V, Cucca F, Fiorillo E, Uzzau S.

Microbiome. 2017 Jul 14;5(1):79. doi: 10.1186/s40168-017-0293-3.

9.

Metaproteogenomics Reveals Taxonomic and Functional Changes between Cecal and Fecal Microbiota in Mouse.

Tanca A, Manghina V, Fraumene C, Palomba A, Abbondio M, Deligios M, Silverman M, Uzzau S.

Front Microbiol. 2017 Mar 14;8:391. doi: 10.3389/fmicb.2017.00391. eCollection 2017.

10.

Diversity and functions of the sheep faecal microbiota: a multi-omic characterization.

Tanca A, Fraumene C, Manghina V, Palomba A, Abbondio M, Deligios M, Pagnozzi D, Addis MF, Uzzau S.

Microb Biotechnol. 2017 May;10(3):541-554. doi: 10.1111/1751-7915.12462. Epub 2017 Feb 6.

11.

The impact of sequence database choice on metaproteomic results in gut microbiota studies.

Tanca A, Palomba A, Fraumene C, Pagnozzi D, Manghina V, Deligios M, Muth T, Rapp E, Martens L, Addis MF, Uzzau S.

Microbiome. 2016 Sep 27;4(1):51.

12.

Protein expression changes induced in a malignant melanoma cell line by the curcumin analogue compound D6.

Pisano M, Palomba A, Tanca A, Pagnozzi D, Uzzau S, Addis MF, Dettori MA, Fabbri D, Palmieri G, Rozzo C.

BMC Cancer. 2016 May 18;16:317. doi: 10.1186/s12885-016-2362-6.

13.

A human gut metaproteomic dataset from stool samples pretreated or not by differential centrifugation.

Tanca A, Palomba A, Pisanu S, Addis MF, Uzzau S.

Data Brief. 2015 Jul 26;4:559-62. doi: 10.1016/j.dib.2015.07.014. eCollection 2015 Sep.

14.

Enrichment or depletion? The impact of stool pretreatment on metaproteomic characterization of the human gut microbiota.

Tanca A, Palomba A, Pisanu S, Addis MF, Uzzau S.

Proteomics. 2015 Oct;15(20):3474-85. doi: 10.1002/pmic.201400573. Epub 2015 Mar 19.

PMID:
25677681
15.

A straightforward and efficient analytical pipeline for metaproteome characterization.

Tanca A, Palomba A, Pisanu S, Deligios M, Fraumene C, Manghina V, Pagnozzi D, Addis MF, Uzzau S.

Microbiome. 2014 Dec 10;2(1):49. doi: 10.1186/s40168-014-0049-2. eCollection 2014.

16.

Evaluating the impact of different sequence databases on metaproteome analysis: insights from a lab-assembled microbial mixture.

Tanca A, Palomba A, Deligios M, Cubeddu T, Fraumene C, Biosa G, Pagnozzi D, Addis MF, Uzzau S.

PLoS One. 2013 Dec 9;8(12):e82981. doi: 10.1371/journal.pone.0082981. eCollection 2013.

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