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Items: 1 to 20 of 35

1.

Species-specific transcriptomic network inference of interspecies interactions.

McClure RS, Overall CC, Hill EA, Song HS, Charania M, Bernstein HC, McDermott JE, Beliaev AS.

ISME J. 2018 Aug;12(8):2011-2023. doi: 10.1038/s41396-018-0145-6. Epub 2018 May 24.

PMID:
29795448
2.

Conversion of stranded waste-stream carbon and nutrients into value-added products via metabolically coupled binary heterotroph-photoautotroph system.

Bohutskyi P, Kucek LA, Hill E, Pinchuk GE, Mundree SG, Beliaev AS.

Bioresour Technol. 2018 Jul;260:68-75. doi: 10.1016/j.biortech.2018.02.080. Epub 2018 Feb 19.

PMID:
29614453
3.

Indirect Interspecies Regulation: Transcriptional and Physiological Responses of a Cyanobacterium to Heterotrophic Partnership.

Bernstein HC, McClure RS, Thiel V, Sadler NC, Kim YM, Chrisler WB, Hill EA, Bryant DA, Romine MF, Jansson JK, Fredrickson JK, Beliaev AS.

mSystems. 2017 Mar 7;2(2). pii: e00181-16. doi: 10.1128/mSystems.00181-16. eCollection 2017 Mar-Apr.

4.

Dinitrogenase-Driven Photobiological Hydrogen Production Combats Oxidative Stress in Cyanothece sp. Strain ATCC 51142.

Sadler NC, Bernstein HC, Melnicki MR, Charania MA, Hill EA, Anderson LN, Monroe ME, Smith RD, Beliaev AS, Wright AT.

Appl Environ Microbiol. 2016 Nov 21;82(24):7227-7235. Print 2016 Dec 15.

5.

Network analysis of transcriptomics expands regulatory landscapes in Synechococcus sp. PCC 7002.

McClure RS, Overall CC, McDermott JE, Hill EA, Markillie LM, McCue LA, Taylor RC, Ludwig M, Bryant DA, Beliaev AS.

Nucleic Acids Res. 2016 Oct 14;44(18):8810-8825. Epub 2016 Aug 27.

6.

Unlocking the Constraints of Cyanobacterial Productivity: Acclimations Enabling Ultrafast Growth.

Bernstein HC, McClure RS, Hill EA, Markillie LM, Chrisler WB, Romine MF, McDermott JE, Posewitz MC, Bryant DA, Konopka AE, Fredrickson JK, Beliaev AS.

MBio. 2016 Jul 26;7(4). pii: e00949-16. doi: 10.1128/mBio.00949-16.

7.

Engineering microbial consortia for controllable outputs.

Lindemann SR, Bernstein HC, Song HS, Fredrickson JK, Fields MW, Shou W, Johnson DR, Beliaev AS.

ISME J. 2016 Sep;10(9):2077-84. doi: 10.1038/ismej.2016.26. Epub 2016 Mar 11.

8.

Multi-Omic Dynamics Associate Oxygenic Photosynthesis with Nitrogenase-Mediated H2 Production in Cyanothece sp. ATCC 51142.

Bernstein HC, Charania MA, McClure RS, Sadler NC, Melnicki MR, Hill EA, Markillie LM, Nicora CD, Wright AT, Romine MF, Beliaev AS.

Sci Rep. 2015 Nov 3;5:16004. doi: 10.1038/srep16004.

9.

Lauric Acid Production in a Glycogen-Less Strain of Synechococcus sp. PCC 7002.

Work VH, Melnicki MR, Hill EA, Davies FK, Kucek LA, Beliaev AS, Posewitz MC.

Front Bioeng Biotechnol. 2015 Apr 24;3:48. doi: 10.3389/fbioe.2015.00048. eCollection 2015.

10.

Integrated in silico Analyses of Regulatory and Metabolic Networks of Synechococcus sp. PCC 7002 Reveal Relationships between Gene Centrality and Essentiality.

Song HS, McClure RS, Bernstein HC, Overall CC, Hill EA, Beliaev AS.

Life (Basel). 2015 Mar 27;5(2):1127-40. doi: 10.3390/life5021127.

11.

Effect of mono- and dichromatic light quality on growth rates and photosynthetic performance of Synechococcus sp. PCC 7002.

Bernstein HC, Konopka A, Melnicki MR, Hill EA, Kucek LA, Zhang S, Shen G, Bryant DA, Beliaev AS.

Front Microbiol. 2014 Sep 19;5:488. doi: 10.3389/fmicb.2014.00488. eCollection 2014.

12.

Engineering Limonene and Bisabolene Production in Wild Type and a Glycogen-Deficient Mutant of Synechococcus sp. PCC 7002.

Davies FK, Work VH, Beliaev AS, Posewitz MC.

Front Bioeng Biotechnol. 2014 Jun 19;2:21. doi: 10.3389/fbioe.2014.00021. eCollection 2014.

13.

Characterization of protein redox dynamics induced during light-to-dark transitions and nutrient limitation in cyanobacteria.

Ansong C, Sadler NC, Hill EA, Lewis MP, Zink EM, Smith RD, Beliaev AS, Konopka AE, Wright AT.

Front Microbiol. 2014 Jul 3;5:325. doi: 10.3389/fmicb.2014.00325. eCollection 2014.

14.

Inference of interactions in cyanobacterial-heterotrophic co-cultures via transcriptome sequencing.

Beliaev AS, Romine MF, Serres M, Bernstein HC, Linggi BE, Markillie LM, Isern NG, Chrisler WB, Kucek LA, Hill EA, Pinchuk GE, Bryant DA, Wiley HS, Fredrickson JK, Konopka A.

ISME J. 2014 Nov;8(11):2243-55. doi: 10.1038/ismej.2014.69. Epub 2014 Apr 29.

15.

Live cell chemical profiling of temporal redox dynamics in a photoautotrophic cyanobacterium.

Sadler NC, Melnicki MR, Serres MH, Merkley ED, Chrisler WB, Hill EA, Romine MF, Kim S, Zink EM, Datta S, Smith RD, Beliaev AS, Konopka A, Wright AT.

ACS Chem Biol. 2014 Jan 17;9(1):291-300. doi: 10.1021/cb400769v. Epub 2013 Nov 6.

PMID:
24168666
16.

Computational evaluation of Synechococcus sp. PCC 7002 metabolism for chemical production.

Vu TT, Hill EA, Kucek LA, Konopka AE, Beliaev AS, Reed JL.

Biotechnol J. 2013 May;8(5):619-30. doi: 10.1002/biot.201200315. Epub 2013 Apr 24.

PMID:
23613453
17.

Feedback-controlled LED photobioreactor for photophysiological studies of cyanobacteria.

Melnicki MR, Pinchuk GE, Hill EA, Kucek LA, Stolyar SM, Fredrickson JK, Konopka AE, Beliaev AS.

Bioresour Technol. 2013 Apr;134:127-33. doi: 10.1016/j.biortech.2013.01.079. Epub 2013 Feb 10.

PMID:
23500569
18.

Dynamic modeling of aerobic growth of Shewanella oneidensis. Predicting triauxic growth, flux distributions, and energy requirement for growth.

Song HS, Ramkrishna D, Pinchuk GE, Beliaev AS, Konopka AE, Fredrickson JK.

Metab Eng. 2013 Jan;15:25-33. doi: 10.1016/j.ymben.2012.08.004. Epub 2012 Sep 26.

PMID:
23022551
19.

Sustained H(2) production driven by photosynthetic water splitting in a unicellular cyanobacterium.

Melnicki MR, Pinchuk GE, Hill EA, Kucek LA, Fredrickson JK, Konopka A, Beliaev AS.

MBio. 2012 Aug 7;3(4):e00197-12. doi: 10.1128/mBio.00197-12. Print 2012.

20.

Binding Motifs in Bacterial Gene Promoters Modulate Transcriptional Effects of Global Regulators CRP and ArcA.

Leuze MR, Karpinets TV, Syed MH, Beliaev AS, Uberbacher EC.

Gene Regul Syst Bio. 2012;6:93-107. doi: 10.4137/GRSB.S9357. Epub 2012 May 30.

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