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Items: 1 to 20 of 38

1.

Unipept 4.0: Functional Analysis of Metaproteome Data.

Gurdeep Singh R, Tanca A, Palomba A, Van der Jeugt F, Verschaffelt P, Uzzau S, Martens L, Dawyndt P, Mesuere B.

J Proteome Res. 2019 Feb 1;18(2):606-615. doi: 10.1021/acs.jproteome.8b00716. Epub 2018 Dec 4.

PMID:
30465426
2.

Clostridial Butyrate Biosynthesis Enzymes Are Significantly Depleted in the Gut Microbiota of Nonobese Diabetic Mice.

Tanca A, Palomba A, Fraumene C, Manghina V, Silverman M, Uzzau S.

mSphere. 2018 Oct 24;3(5). pii: e00492-18. doi: 10.1128/mSphere.00492-18.

3.

Caloric restriction promotes functional changes involving short-chain fatty acid biosynthesis in the rat gut microbiota.

Tanca A, Abbondio M, Palomba A, Fraumene C, Marongiu F, Serra M, Pagnozzi D, Laconi E, Uzzau S.

Sci Rep. 2018 Oct 3;8(1):14778. doi: 10.1038/s41598-018-33100-y.

4.

Metagenomic Taxonomy-Guided Database-Searching Strategy for Improving Metaproteomic Analysis.

Xiao J, Tanca A, Jia B, Yang R, Wang B, Zhang Y, Li J.

J Proteome Res. 2018 Apr 6;17(4):1596-1605. doi: 10.1021/acs.jproteome.7b00894. Epub 2018 Feb 26.

PMID:
29436230
5.

Disseminating Metaproteomic Informatics Capabilities and Knowledge Using the Galaxy-P Framework.

Blank C, Easterly C, Gruening B, Johnson J, Kolmeder CA, Kumar P, May D, Mehta S, Mesuere B, Brown Z, Elias JE, Hervey WJ, McGowan T, Muth T, Nunn B, Rudney J, Tanca A, Griffin TJ, Jagtap PD.

Proteomes. 2018 Jan 31;6(1). pii: E7. doi: 10.3390/proteomes6010007.

6.

The Sarda Sheep Host Fecal Proteome.

Palomba A, Tanca A, Addis MF, Pagnozzi D, Uzzau S.

Proteomics. 2018 Feb;18(3-4). doi: 10.1002/pmic.201700272. Epub 2018 Feb 6.

PMID:
29328543
7.

Multi-Omic Biogeography of the Gastrointestinal Microbiota of a Pre-Weaned Lamb.

Palomba A, Tanca A, Fraumene C, Abbondio M, Fancello F, Atzori AS, Uzzau S.

Proteomes. 2017 Dec 18;5(4). pii: E36. doi: 10.3390/proteomes5040036.

8.

Caloric restriction promotes rapid expansion and long-lasting increase of Lactobacillus in the rat fecal microbiota.

Fraumene C, Manghina V, Cadoni E, Marongiu F, Abbondio M, Serra M, Palomba A, Tanca A, Laconi E, Uzzau S.

Gut Microbes. 2018 Mar 4;9(2):104-114. doi: 10.1080/19490976.2017.1371894. Epub 2017 Sep 21.

9.

Protective major histocompatibility complex allele prevents type 1 diabetes by shaping the intestinal microbiota early in ontogeny.

Silverman M, Kua L, Tanca A, Pala M, Palomba A, Tanes C, Bittinger K, Uzzau S, Benoist C, Mathis D.

Proc Natl Acad Sci U S A. 2017 Sep 5;114(36):9671-9676. doi: 10.1073/pnas.1712280114. Epub 2017 Aug 22.

10.

Potential and active functions in the gut microbiota of a healthy human cohort.

Tanca A, Abbondio M, Palomba A, Fraumene C, Manghina V, Cucca F, Fiorillo E, Uzzau S.

Microbiome. 2017 Jul 14;5(1):79. doi: 10.1186/s40168-017-0293-3.

11.

Metaproteogenomics Reveals Taxonomic and Functional Changes between Cecal and Fecal Microbiota in Mouse.

Tanca A, Manghina V, Fraumene C, Palomba A, Abbondio M, Deligios M, Silverman M, Uzzau S.

Front Microbiol. 2017 Mar 14;8:391. doi: 10.3389/fmicb.2017.00391. eCollection 2017.

12.

Diversity and functions of the sheep faecal microbiota: a multi-omic characterization.

Tanca A, Fraumene C, Manghina V, Palomba A, Abbondio M, Deligios M, Pagnozzi D, Addis MF, Uzzau S.

Microb Biotechnol. 2017 May;10(3):541-554. doi: 10.1111/1751-7915.12462. Epub 2017 Feb 6.

13.

A first immunohistochemistry study of transketolase and transketolase-like 1 expression in canine hyperplastic and neoplastic mammary lesions.

Burrai GP, Tanca A, Cubeddu T, Abbondio M, Polinas M, Addis MF, Antuofermo E.

BMC Vet Res. 2017 Jan 31;13(1):38. doi: 10.1186/s12917-017-0961-3.

14.

The impact of sequence database choice on metaproteomic results in gut microbiota studies.

Tanca A, Palomba A, Fraumene C, Pagnozzi D, Manghina V, Deligios M, Muth T, Rapp E, Martens L, Addis MF, Uzzau S.

Microbiome. 2016 Sep 27;4(1):51.

15.

Protein expression changes induced in a malignant melanoma cell line by the curcumin analogue compound D6.

Pisano M, Palomba A, Tanca A, Pagnozzi D, Uzzau S, Addis MF, Dettori MA, Fabbri D, Palmieri G, Rozzo C.

BMC Cancer. 2016 May 18;16:317. doi: 10.1186/s12885-016-2362-6.

16.

Atypical carcinoid and large cell neuroendocrine carcinoma of the lung: a proteomic dataset from formalin-fixed archival samples.

Tanca A, Addis MF, Pisanu S, Abbondio M, Pagnozzi D, Eccher A, Rindi G, Cossu-Rocca P, Uzzau S, Fanciulli G.

Data Brief. 2016 Mar 9;7:529-31. doi: 10.1016/j.dib.2016.02.083. eCollection 2016 Jun.

17.

Proteomic analysis of Rhodotorula mucilaginosa: dealing with the issues of a non-conventional yeast.

Addis MF, Tanca A, Landolfo S, Abbondio M, Cutzu R, Biosa G, Pagnozzi D, Uzzau S, Mannazzu I.

Yeast. 2016 Aug;33(8):433-49. doi: 10.1002/yea.3162. Epub 2016 May 13.

18.

A human gut metaproteomic dataset from stool samples pretreated or not by differential centrifugation.

Tanca A, Palomba A, Pisanu S, Addis MF, Uzzau S.

Data Brief. 2015 Jul 26;4:559-62. doi: 10.1016/j.dib.2015.07.014. eCollection 2015 Sep.

19.

Draft Genome Sequence of Rhodotorula mucilaginosa, an Emergent Opportunistic Pathogen.

Deligios M, Fraumene C, Abbondio M, Mannazzu I, Tanca A, Addis MF, Uzzau S.

Genome Announc. 2015 Apr 9;3(2). pii: e00201-15. doi: 10.1128/genomeA.00201-15.

20.

Full-length protein extraction protocols and gel-based downstream applications in formalin-fixed tissue proteomics.

Tanca A, Uzzau S, Addis MF.

Methods Mol Biol. 2015;1295:117-34. doi: 10.1007/978-1-4939-2550-6_11.

PMID:
25820719

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