Isolation and characterisation of smallminded, a Drosophila gene encoding a new member of the Cdc48p/VCP subfamily of AAA proteins

Gene. 1998 Feb 27;208(2):191-9. doi: 10.1016/s0378-1119(97)00652-5.

Abstract

Smallminded (smid) encodes a new member of the cdc48p/VCP subfamily of AAA proteins in Drosophila. The gene was isolated by plasmid rescue from a GAL4 enhancer trap line which shows reporter gene expression in neuroblasts, imaginal disks and a subset of sensory neurons. Larvae homozygous for the insert arrest development as second instar larvae and die without pupating. The most obvious defect in these larvae is a significantly reduced CNS, hence the naming of the gene as smallminded. The deduced amino acid sequence of smid contains a tandem duplication of the AAA nucleotide binding domain characteristic of the cdc48p/VCP subfamily. Overall, smid shares 33% identical residues with its closest relative, yeast L0919-chrXII and 26-29% with other members of the cdc48p/VCP subfamily. The most highly conserved regions of the predicted protein structure are found in and around the nucleotide binding domains. The gene is expressed at all developmental stages.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Amino Acid Sequence
  • Animals
  • Base Sequence
  • Brain / anatomy & histology
  • Brain / physiology
  • Cell Cycle Proteins / biosynthesis*
  • Cell Cycle Proteins / chemistry
  • Cell Cycle Proteins / genetics*
  • Cloning, Molecular
  • Drosophila / genetics*
  • Drosophila / physiology
  • Drosophila Proteins*
  • Genes, Insect*
  • Genes, Reporter
  • Heterozygote
  • Homozygote
  • Larva
  • Molecular Sequence Data
  • Neurons, Afferent / metabolism
  • Recombinant Fusion Proteins / biosynthesis
  • Sequence Alignment
  • Sequence Homology, Amino Acid

Substances

  • Cell Cycle Proteins
  • Drosophila Proteins
  • Recombinant Fusion Proteins
  • smid protein, Drosophila

Associated data

  • GENBANK/X99207