Characterization of the chromosomal gene and promoter for human insulin-like growth factor binding protein-5

J Biol Chem. 1994 Apr 8;269(14):10891-8.

Abstract

To better understand the regulation of insulin-like growth factor binding protein-5 (IGFBP-5) expression, we cloned the IGFBP-5 gene from human genomic libraries and identified a region in the 5' flanking sequence which functions as a promoter. The human IGFBP-5 gene is divided into four exons which, primarily due to a first intron of approximately 25 kilobases, span approximately 33 kilobases of DNA. Southern analysis identified a single copy of the IGFBP-5 gene in the haploid human genome, and several independent mapping strategies found this gene tightly linked with, and in opposite transcriptional orientation to, the IGFBP-2 gene at chromosomal region 2q33-34. Primer extension studies identified the IGFBP-5 mRNA cap site 772 base pairs (bp) 5' to the first nucleotide of the translation start codon. Analysis of the 5'-flanking sequence identified a potential TATA element beginning 33 bp 5' to the mRNA cap site. When a DNA fragment containing this cap site and 461 bp of upstream sequence was placed 5' to the chloramphenicol acetyltransferase reporter gene and transfected into MDA-MB-468 human breast cancer cells, it directed chloramphenicol acetyltransferase expression in an orientation-specific manner, suggesting that this region contains elements essential for IGFBP-5 promoter activity.

Publication types

  • Research Support, Non-U.S. Gov't
  • Research Support, U.S. Gov't, P.H.S.

MeSH terms

  • Amino Acid Sequence
  • Base Sequence
  • Carrier Proteins / genetics*
  • Carrier Proteins / metabolism
  • Cells, Cultured
  • Chromosome Mapping
  • Chromosomes, Human*
  • DNA, Complementary
  • Humans
  • Insulin-Like Growth Factor Binding Protein 5
  • Molecular Sequence Data
  • Promoter Regions, Genetic*
  • RNA, Messenger / metabolism
  • Somatomedins / metabolism*

Substances

  • Carrier Proteins
  • DNA, Complementary
  • Insulin-Like Growth Factor Binding Protein 5
  • RNA, Messenger
  • Somatomedins

Associated data

  • GENBANK/L27556
  • GENBANK/L27557
  • GENBANK/L27558
  • GENBANK/L27559
  • GENBANK/L27560