Thirteen-gene DNA methylation analysis of oral brushing samples: A potential surveillance tool for periodic monitoring of treated patients with oral cancer

Head Neck. 2024 Apr;46(4):728-739. doi: 10.1002/hed.27621. Epub 2024 Jan 3.

Abstract

Background: We evaluated the prognostic role of 13-gene DNA methylation analysis by oral brushing repeatedly performed during the follow-up of patients surgically treated for oral cancer.

Methods: This is a nested case-control study including 61 patients for a total of 64 outcomes (2/61 patients experienced multiple relapses). Samples were collected at baseline (4-10 months after OSCC resection) and repeatedly every 4-10 months until relapse or death. DNA methylation scores were classified as persistently positive, persistently negative, or mixed.

Results: Twenty cases who had persistently positive scores and 30 cases with mixed scores had, respectively, an almost 42-fold (p < 0.001) and 32-fold (p = 0.006) higher likelihood of relapse, compared to 14 patients with persistently negative scores. The last score before reoccurrence was positive in 18/19 secondary events.

Conclusions: The 13-gene DNA methylation analysis may be considered for the surveillance of patients treated for oral carcinoma.

Keywords: DNA-methylation analysis; epigenetic instability; follow-up surveillance; oral brushing; oral cancer.

MeSH terms

  • Carcinoma, Squamous Cell* / genetics
  • Carcinoma, Squamous Cell* / surgery
  • Case-Control Studies
  • DNA Methylation
  • Humans
  • Mouth Neoplasms* / genetics
  • Mouth Neoplasms* / surgery
  • Neoplasm Recurrence, Local / genetics
  • Recurrence

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