Cryo-EM structure of the periplasmic tunnel of T7 DNA-ejectosome at 2.7 Å resolution

Mol Cell. 2021 Aug 5;81(15):3145-3159.e7. doi: 10.1016/j.molcel.2021.06.001. Epub 2021 Jul 1.

Abstract

Hershey and Chase used bacteriophage T2 genome delivery inside Escherichia coli to demonstrate that DNA, not protein, is the genetic material. Seventy years later, our understanding of viral genome delivery in prokaryotes remains limited, especially for short-tailed phages of the Podoviridae family. These viruses expel mysterious ejection proteins found inside the capsid to form a DNA-ejectosome for genome delivery into bacteria. Here, we reconstitute the phage T7 DNA-ejectosome components gp14, gp15, and gp16 and solve the periplasmic tunnel structure at 2.7 Å resolution. We find that gp14 forms an outer membrane pore, gp15 assembles into a 210 Å hexameric DNA tube spanning the host periplasm, and gp16 extends into the host cytoplasm forming a ∼4,200 residue hub. Gp16 promotes gp15 oligomerization, coordinating peptidoglycan hydrolysis, DNA binding, and lipid insertion. The reconstituted gp15:gp16 complex lacks channel-forming activity, suggesting that the pore for DNA passage forms only transiently during genome ejection.

Keywords: DNA-ejectosome; Podoviridae; bacteriophage T7; cell envelope; cryo-electron microscopy; ejection proteins; gp14; gp15; gp16; internal core proteins; pore-channel activity; viral genome-ejection.

Publication types

  • Research Support, N.I.H., Extramural

MeSH terms

  • Bacteriophage T7 / genetics*
  • Computational Biology
  • Cryoelectron Microscopy
  • Cytoplasm / chemistry
  • DNA, Viral / chemistry*
  • DNA, Viral / metabolism
  • Lipid Bilayers / metabolism
  • Periplasm / chemistry*
  • Periplasm / genetics
  • Periplasm / metabolism
  • Podoviridae / chemistry
  • Podoviridae / genetics
  • Viral Core Proteins / chemistry*
  • Viral Core Proteins / metabolism

Substances

  • DNA, Viral
  • Lipid Bilayers
  • Viral Core Proteins
  • gene16 product, bacteriophage T7