Molecular genetic study on GATA5 gene promoter in acute myocardial infarction

PLoS One. 2021 Mar 8;16(3):e0248203. doi: 10.1371/journal.pone.0248203. eCollection 2021.

Abstract

Background: Acute myocardial infarction (AMI) is a severe type of coronary artery disease, caused by coronary occlusion and followed by cardiac ischaemia. GATA binding protein 5 (GATA5) is an important member of GATA family and plays an important role in vascular inflammation, endothelial function, oxidative stress and cell metabolism. Previous studies have shown that the DNA sequence variants (DSVs) in GATA4 and GATA6 promoter can increase susceptibility to AMI. In this study, we explored the relationship between GATA5 promoter and AMI for the first time, hoping to provide a new genetic basis for understanding the pathogenesis of AMI.

Methods: GATA5 promoter was sequenced in 683 individuals (332 AMI patients and 351 controls). The transcriptional activity of the GATA5 promoter with or without DSVs in HEK-293 cells, H9c2 cells and primary neonatal rat cardiomyocytes were examined by Promega Dual-Luciferase® Reporter Assay system. Electrophoretic mobility shift assay (EMSA) was performed to explore whether the DSVs interfered with the binding of transcription factors (TFs).

Results: Nine mutations have been found in GATA5 promoter, eight of them evidently altered the transcriptional activity of the GATA5 promoter, five of them disrupted the binding of TFs (such as farnesoid X receptor). Furthermore, haplotype AT (across rs80197101 and rs77067995) is a dangerous haplotype of AMI. Genotype GA and allele A of rs80197101 and genotype CT and allele T of rs77067995 are the risk factors of AMI.

Conclusions: DSVs in GATA5 promoter can increase susceptibility to AMI. But the mechanism remains to be verified in vivo.

Publication types

  • Clinical Trial
  • Research Support, Non-U.S. Gov't

MeSH terms

  • Adult
  • Aged
  • Animals
  • Female
  • GATA4 Transcription Factor / genetics
  • GATA5 Transcription Factor / genetics*
  • GATA6 Transcription Factor / genetics
  • Genetic Predisposition to Disease*
  • Genotype*
  • HEK293 Cells
  • Humans
  • Male
  • Middle Aged
  • Mutation*
  • Myocardial Infarction / genetics*
  • Promoter Regions, Genetic*
  • Rats

Substances

  • GATA4 Transcription Factor
  • GATA4 protein, human
  • GATA5 Transcription Factor
  • GATA5 protein, human
  • GATA6 Transcription Factor
  • GATA6 protein, human

Grants and funding

This work was supported by the National Natural Science Foundation of China (81870279). BY (Bo Yan) received the award. The funders had no role in study design, data collection and analysis, decision to publish, or preparation of the manuscript.