QSAR Models for Human Carcinogenicity: An Assessment Based on Oral and Inhalation Slope Factors

Molecules. 2020 Dec 29;26(1):127. doi: 10.3390/molecules26010127.

Abstract

Carcinogenicity is a crucial endpoint for the safety assessment of chemicals and products. During the last few decades, the development of quantitative structure-activity relationship ((Q)SAR) models has gained importance for regulatory use, in combination with in vitro testing or expert-based reasoning. Several classification models can now predict both human and rat carcinogenicity, but there are few models to quantitatively assess carcinogenicity in humans. To our knowledge, slope factor (SF), a parameter describing carcinogenicity potential used especially for human risk assessment of contaminated sites, has never been modeled for both inhalation and oral exposures. In this study, we developed classification and regression models for inhalation and oral SFs using data from the Risk Assessment Information System (RAIS) and different machine learning approaches. The models performed well in classification, with accuracies for the external set of 0.76 and 0.74 for oral and inhalation exposure, respectively, and r2 values of 0.57 and 0.65 in the regression models for oral and inhalation SFs in external validation. These models might therefore support regulators in (de)prioritizing substances for regulatory action and in weighing evidence in the context of chemical safety assessments. Moreover, these models are implemented on the VEGA platform and are now freely downloadable online.

Keywords: QSAR; cancer slope factor; in silico method; prioritization.

MeSH terms

  • Administration, Oral
  • Carcinogens / administration & dosage
  • Carcinogens / chemistry*
  • Carcinogens / toxicity*
  • Databases, Factual
  • Humans
  • Inhalation Exposure / adverse effects
  • Machine Learning
  • Neoplasms / chemically induced*
  • Quantitative Structure-Activity Relationship
  • Regression Analysis
  • Risk Assessment

Substances

  • Carcinogens