A multi-omics approach to investigate the inflammatory response to life course socioeconomic position

Epigenomics. 2020 Aug;12(15):1287-1302. doi: 10.2217/epi-2019-0261. Epub 2020 Sep 2.

Abstract

Aim: Inflammation represents a potential pathway through which socioeconomic position (SEP) is biologically embedded. Materials & methods: We analyzed inflammatory biomarkers in response to life course SEP by integrating multi-omics DNA-methylation, gene expression and protein level in 178 European Prospective Investigation into Cancer and Nutrition-Italy participants. Results & conclusion: We identified 61 potential cis acting CpG loci whose methylation levels were associated with gene expression at a Bonferroni correction. We examined the relationships between life course SEP and these 61 cis-acting regulatory methylation sites individually and jointly using several scores. Less-advantaged SEP participants exhibit, later in life, a lower inflammatory methylome score, suggesting an overall increased expression of the corresponding inflammatory genes or proteins, supporting the hypothesis that SEP impacts adult physiology through inflammation.

Keywords: DNA methylation; gene expression; inflammation; life course epidemiology; protein; socioeconomic position.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Adult
  • CpG Islands
  • DNA Methylation
  • Epigenome*
  • Female
  • Humans
  • Inflammation / epidemiology*
  • Italy / epidemiology
  • Male
  • Middle Aged
  • Social Class*
  • Social Determinants of Health*