Format

Send to

Choose Destination
Bioinformation. 2019 Dec 17;15(11):838-844. doi: 10.6026/97320630015838. eCollection 2019.

Molecular modelling and docking analysis of pleurocidin (an antimicrobial peptide) like peptides with enterotoxin H from Klebsilla pneumonia.

Author information

1
Research and Development Wing, Sree Balaji Medical College and Hospital, BIHER, Chrompet, Chennai 600044, India.
2
Department of Animal Science, School of Life Sciences, Bharathidasan University, Tiruchirappalli, India.
3
Department of Microbiology, Sree Balaji Medical College and Hospital, BIHER, Chrompet, Chennai600044, India.
4
Department of Biotechnology, Srimad Andavan College, Tiruchirappalli, India.
5
Department of Animal Behavior and Physiology, Madurai Kamaraj University, Palkalaiperur, Madurai, India.
6
Department of Anatomy, Sree Balaji Medical College and Hospital, BIHER, Chrompet, Chennai-600044, India.
7
Department of Human genetics and molecular biology, Bharathiyar University, Coimbatore, Tamilnadu, India.

Abstract

Enterotoxin H is a key molecular target for replication and establishment of Klebsilla pneumonia in the host. Therefore, it is of interest to study the interaction of enterotoxin H with pleurocidin like peptides using molecular modelling (template PDB ID: 1YCE), Lig-Plot (ligand construction) and docking tools for therapeutic consideration. The hydrophobic pocket and the active site residues (Val 13, Met 16, Gly 25, Ala 25, and Ile 28) were identified using Cast P, Molegro and Sitehound tools. Docking results show that the pleurocidin like peptides interacts with the active sites of enterotoxin H with 300.96 docking score with optimal binding features.

KEYWORDS:

Enterotoxin H protein; Klebsilla pneumonia; anti microbial peptide; docking; modeling; pleurocidin

Supplemental Content

Full text links

Icon for PubMed Central
Loading ...
Support Center