MicroRNA profiling of human myeloid angiogenic cells derived from peripheral blood mononuclear cells

Biochem Cell Biol. 2020 Apr;98(2):203-207. doi: 10.1139/bcb-2019-0163. Epub 2019 Sep 4.

Abstract

Human myeloid angiogenic cells (MACs), also termed early endothelial progenitor cells, play an important role in neovascularization and vascular repair. MicroRNAs (miRNAs) are a class of naturally occurring, noncoding, short (∼22 nucleotides), single-stranded RNAs that regulate gene expression post-transcriptionally. MiRNAs have been shown to regulate MAC function. A miRNA signature of MACs was described approximately a decade ago, and many new miRNAs have been discovered in recent years. In this study, we aimed to provide an up-to-date miRNA signature for human MACs. MACs were obtained by culture of human peripheral blood mononuclear cells in endothelial medium for 7 days. Using qPCR array analysis we identified 72 highly expressed miRNAs (CT value < 30) in human MACs. RT-qPCR quantification of select miRNAs revealed a strong correlation between the CT values detected by the array analysis and RT-qPCR, suggesting the miRNA signature generated by the qPCR array assay is accurate and reliable. Experimentally validated target genes of the 10 most highly expressed miRNAs were retrieved. Only a few of the targets and their respective miRNAs have been studied for their role in MAC biology. Our study therefore provides a valuable repository of miRNAs for future exploration of miRNA function in MACs.

Keywords: RT–qPCR; analyse par qPCR d’un jeu ordonné de miARN; cellules myéloïdes angiogéniques; expression profiling; microARN; microRNA; myeloid angiogenic cell; profil d’expression; qPCR microarray analysis.

MeSH terms

  • Adult
  • Endothelial Cells / metabolism
  • Female
  • Flow Cytometry
  • Gene Expression Profiling
  • Gene Expression Regulation*
  • Humans
  • Leukocyte Common Antigens / metabolism
  • Leukocytes, Mononuclear / metabolism*
  • Lipopolysaccharide Receptors / metabolism
  • Male
  • MicroRNAs / metabolism*
  • Middle Aged
  • Myeloid Cells / metabolism*
  • Neovascularization, Pathologic*
  • Oligonucleotide Array Sequence Analysis
  • Platelet Endothelial Cell Adhesion Molecule-1 / metabolism
  • Polymerase Chain Reaction
  • Vascular Endothelial Growth Factor Receptor-2 / metabolism

Substances

  • CD14 protein, human
  • Lipopolysaccharide Receptors
  • MicroRNAs
  • PECAM1 protein, human
  • Platelet Endothelial Cell Adhesion Molecule-1
  • KDR protein, human
  • Vascular Endothelial Growth Factor Receptor-2
  • Leukocyte Common Antigens
  • PTPRC protein, human