(a) Schematic of the Blood-brain barrier (BBB). Nutrient-rich, oxygenated blood is pumped into the brain through cerebral arterial BECs (arteries and arterioles), which are protected and supported by smooth muscle cells (SMCs) that cover the endothelium and form a basement membrane layered by astrocytic end-feet of the brain parenchyma. The blood is transferred to highly specialized capillaries, which are comprised of BECs that form unique tight junctions and are wrapped by pericytes (Peric.) within the endothelial basement membrane, which is then covered by astrocytic end-feet. BBB capillaries are the site of controlled transport of fluids and solutes into the CNS. Immuno-surveillance and occasional extravasation of leukocytes (Leuk.) into the CNS parenchyma occurs at the level of postcapillary venous cells (venules and veins) the vascular segments into which blood flows after passing through the capillaries. Postcapillary Venules contain enlarged perivascular space between the endothelial and astrocytic basement membranes where occasional immune cells can reside.,
(b) Unbiased clustering of 112 aged and 160 young hippocampal BECs using whole transcriptome and visualization with tSNE reveals 3 molecularly distinct BEC populations.
(c) Violin plots of Vcam1 reveal differing levels of the transcript in each of the cell clusters. Minima, maxima, median, and percentiles are listed in . (n=146 Capillary BECs, n=59 Venous BECs, n=67 Arterial BECs pooled from 8 mice hippocampi).
(d) Dotplot comparing the expression (scaled transcript counts and percent of population expressing) of various classical inflammatory, Notch signaling, arteriolar, venular and capillary markers between the three clusters (Cluster 0: Vcam1-negative, Cluster 1: Vcam1-pos, Cluster 2: Vcam1-pos).
(e) Heatmap of the scaled expression of the top 10 enriched genes (differentially expressed with p<0.05, Mann-Whitney test, two-sided) in each cluster. Genes are ranked by highest log-fold change when compared to all other cells.
(f) tSNE visualization colored by Vcam1 expression levels. Clusters are further annotated by their putative functional-phenotype and vessel segmental identity. (n=146 Capillary BECs, n=59 Venous BECs, n=67 Arterial BECs pooled from 8 mice hippocampi).
(g) GeneAnalytics (GSEA Package)- Brain Endothelial Cell Pathway analysis of the Vcam1−positive venous and arteriolar hippocampal BEC clusters. The top 10 pathways containing Vcam1 are highlighted here, along with the number of genes in each pathway enriched and the score assigned to each pathway.
(h) Violin plots of various inflammation-related genes in each of the 3 distinct clusters. To note, age-related chemokine Ccl11 and its receptor, Ccr3, were not found to be expressed in isolated CD31+ BECs. Minima, maxima, median, and percentiles are listed in . (n=146 Capillary BECs, n=59 Venous BECs, n=67 Arterial BECs pooled from 8 mice hippocampi).
(i) Violin plots of cytokine receptors enriched in the Vcam1−positive venous cluster. Minima, maxima, median, and percentiles are listed in . (n=146 Capillary BECs, n=59 Venous BECs, n=67 Arterial BECs pooled from 8 mice hippocampi).
(j) Young (2.5-month-old) mice were injected with PBS control (n=5 mice high dose, 3 mice low dose), TNF-α (n=3 mice at high dose, 4 mice at low dose), IL-1β (n=4 mice low dose, 4 mice high dose), or IL-6 r.o. (n=4 mice low dose) daily over 5 days (2 µg per injection; low dose) or acutely (10 µg; high dose). Representative confocal images (bottom) and quantification (top) of VCAM1+ staining in the DG. Scale bar = 100 µm. Mean +/− SEM. *p=0.027, **p=0.041, ***p=0.028, ***p=0.006. 1-way ANOVA with Dunnett’s multiple comparison’s test.