Nonsense mutation-dependent reinitiation of translation in mammalian cells

Nucleic Acids Res. 2019 Jul 9;47(12):6330-6338. doi: 10.1093/nar/gkz319.

Abstract

In-frame stop codons mark the termination of translation. However, post-termination ribosomes can reinitiate translation at downstream AUG codons. In mammals, reinitiation is most efficient when the termination codon is positioned close to the 5'-proximal initiation site and around 78 bases upstream of the reinitiation site. The phenomenon was studied mainly in the context of open reading frames (ORFs) found within the 5'-untranslated region, or polycicstronic viral mRNA. We hypothesized that reinitiation of translation following nonsense mutations within the main ORF of p53 can promote the expression of N-truncated p53 isoforms such as Δ40, Δ133 and Δ160p53. Here, we report that expression of all known N-truncated p53 isoforms by reinitiation is mechanistically feasible, including expression of the previously unidentified variant Δ66p53. Moreover, we found that significant reinitiation of translation can be promoted by nonsense mutations located even 126 codons downstream of the 5'-proximal initiation site, and observed when the reinitiation site is positioned between 6 and 243 bases downstream of the nonsense mutation. We also demonstrate that reinitiation can stabilise p53 mRNA transcripts with a premature termination codon, by allowing such transcripts to evade the nonsense mediated decay pathway. Our data suggest that the expression of N-truncated proteins from alleles carrying a premature termination codon is more prevalent than previously thought.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Cell Line
  • Codon, Nonsense*
  • HEK293 Cells
  • Humans
  • Nonsense Mediated mRNA Decay
  • Peptide Chain Initiation, Translational*
  • Promoter Regions, Genetic
  • RNA Stability
  • RNA, Messenger / metabolism
  • Sequence Deletion
  • Tumor Suppressor Protein p53 / biosynthesis
  • Tumor Suppressor Protein p53 / genetics*

Substances

  • Codon, Nonsense
  • RNA, Messenger
  • Tumor Suppressor Protein p53