Mutation update for the SATB2 gene

Hum Mutat. 2019 Aug;40(8):1013-1029. doi: 10.1002/humu.23771. Epub 2019 Jun 18.

Abstract

SATB2-associated syndrome (SAS) is an autosomal dominant neurodevelopmental disorder caused by alterations in the SATB2 gene. Here we present a review of published pathogenic variants in the SATB2 gene to date and report 38 novel alterations found in 57 additional previously unreported individuals. Overall, we present a compilation of 120 unique variants identified in 155 unrelated families ranging from single nucleotide coding variants to genomic rearrangements distributed throughout the entire coding region of SATB2. Single nucleotide variants predicted to result in the occurrence of a premature stop codon were the most commonly seen (51/120 = 42.5%) followed by missense variants (31/120 = 25.8%). We review the rather limited functional characterization of pathogenic variants and discuss current understanding of the consequences of the different molecular alterations. We present an expansive phenotypic review along with novel genotype-phenotype correlations. Lastly, we discuss current knowledge of animal models and present future prospects. This review should help provide better guidance for the care of individuals diagnosed with SAS.

Keywords: SATB2; SATB2-associated syndrome; genotype-phenotype correlation; pathogenic variants; whole exome sequencing.

Publication types

  • Review

MeSH terms

  • Adolescent
  • Animals
  • Child
  • Child, Preschool
  • Codon, Terminator
  • Disease Models, Animal
  • Female
  • Gene Rearrangement
  • Genetic Association Studies
  • Humans
  • Male
  • Matrix Attachment Region Binding Proteins / genetics*
  • Mutation*
  • Mutation, Missense
  • Neurodevelopmental Disorders / genetics*
  • Polymorphism, Single Nucleotide
  • Transcription Factors / genetics*

Substances

  • Codon, Terminator
  • Matrix Attachment Region Binding Proteins
  • SATB2 protein, human
  • Transcription Factors