Quantitative Characterization of α-Synuclein Aggregation in Living Cells through Automated Microfluidics Feedback Control

Cell Rep. 2019 Apr 16;27(3):916-927.e5. doi: 10.1016/j.celrep.2019.03.081.

Abstract

Aggregation of α-synuclein and formation of inclusions are hallmarks of Parkinson's disease (PD). Aggregate formation is affected by cellular environment, but it has been studied almost exclusively in cell-free systems. We quantitatively analyzed α-synuclein inclusion formation and clearance in a yeast cell model of PD expressing either wild-type (WT) α-synuclein or the disease-associated A53T mutant from the galactose (Gal)-inducible promoter. A computer-controlled microfluidics device regulated α-synuclein in cells by means of closed-loop feedback control. We demonstrated that inclusion formation is strictly concentration dependent and that the aggregation threshold of the A53T mutant is about half of the WT α-synuclein (56%). We chemically modulated the proteasomal and autophagic pathways and demonstrated that autophagy is the main determinant of A53T α-synuclein inclusions' clearance. In addition to proposing a technology to overcome current limitations in dynamically regulating protein expression levels, our results contribute to the biology of PD and have relevance for therapeutic applications.

Keywords: aggregation; bioengineering; feedback control; gene expression; microfluidics; synuclein.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Autophagy
  • Gene Expression
  • Humans
  • Image Processing, Computer-Assisted
  • Microfluidics / methods*
  • Microscopy, Fluorescence
  • Models, Biological
  • Mutagenesis, Site-Directed
  • Parkinson Disease / metabolism
  • Parkinson Disease / pathology
  • Proteasome Endopeptidase Complex / metabolism
  • Protein Aggregates
  • Saccharomyces cerevisiae / metabolism
  • Saccharomyces cerevisiae Proteins / chemistry
  • Saccharomyces cerevisiae Proteins / genetics
  • Saccharomyces cerevisiae Proteins / metabolism
  • Single-Cell Analysis
  • alpha-Synuclein / chemistry
  • alpha-Synuclein / genetics
  • alpha-Synuclein / metabolism*

Substances

  • Protein Aggregates
  • Saccharomyces cerevisiae Proteins
  • alpha-Synuclein
  • Proteasome Endopeptidase Complex