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Items: 14

1.

Accurate calculation of side chain packing and free energy with applications to protein molecular dynamics.

Jumper JM, Faruk NF, Freed KF, Sosnick TR.

PLoS Comput Biol. 2018 Dec 27;14(12):e1006342. doi: 10.1371/journal.pcbi.1006342. eCollection 2018 Dec.

2.

Trajectory-based training enables protein simulations with accurate folding and Boltzmann ensembles in cpu-hours.

Jumper JM, Faruk NF, Freed KF, Sosnick TR.

PLoS Comput Biol. 2018 Dec 27;14(12):e1006578. doi: 10.1371/journal.pcbi.1006578. eCollection 2018 Dec.

3.

United States National Postdoc Survey results and the interaction of gender, career choice and mentor impact.

McConnell SC, Westerman EL, Pierre JF, Heckler EJ, Schwartz NB.

Elife. 2018 Dec 18;7. pii: e40189. doi: 10.7554/eLife.40189.

4.

Transcriptome-wide reprogramming of N6-methyladenosine modification by the mouse microbiome.

Wang X, Li Y, Chen W, Shi H, Eren AM, Morozov A, He C, Luo GZ, Pan T.

Cell Res. 2018 Dec 17. doi: 10.1038/s41422-018-0127-2. [Epub ahead of print] No abstract available.

PMID:
30559439
5.

Microbiome characterization by high-throughput transfer RNA sequencing and modification analysis.

Schwartz MH, Wang H, Pan JN, Clark WC, Cui S, Eckwahl MJ, Pan DW, Parisien M, Owens SM, Cheng BL, Martinez K, Xu J, Chang EB, Pan T, Eren AM.

Nat Commun. 2018 Dec 17;9(1):5353. doi: 10.1038/s41467-018-07675-z.

6.

Generation and molecular recognition of melanoma-associated antigen-specific human γδ T cells.

Benveniste PM, Roy S, Nakatsugawa M, Chen ELY, Nguyen L, Millar DG, Ohashi PS, Hirano N, Adams EJ, Zúñiga-Pflücker JC.

Sci Immunol. 2018 Dec 14;3(30). pii: eaav4036. doi: 10.1126/sciimmunol.aav4036.

PMID:
30552102
7.

Proton Countertransport and Coupled Gating in the Sarcoplasmic Reticulum Calcium Pump.

Rui H, Das A, Nakamoto R, Roux B.

J Mol Biol. 2018 Dec 7;430(24):5050-5065. doi: 10.1016/j.jmb.2018.10.014. Epub 2018 Oct 26.

PMID:
30539761
8.

Periplasmic protein EipA determines envelope stress resistance and virulence in Brucella abortus.

Herrou J, Willett JW, Fiebig A, Varesio LM, Czyż DM, Cheng JX, Ultee E, Briegel A, Bigelow L, Babnigg G, Kim Y, Crosson S.

Mol Microbiol. 2018 Dec 8. doi: 10.1111/mmi.14178. [Epub ahead of print]

PMID:
30536925
9.

N6-Methyladenosine methyltransferase ZCCHC4 mediates ribosomal RNA methylation.

Ma H, Wang X, Cai J, Dai Q, Natchiar SK, Lv R, Chen K, Lu Z, Chen H, Shi YG, Lan F, Fan J, Klaholz BP, Pan T, Shi Y, He C.

Nat Chem Biol. 2019 Jan;15(1):88-94. doi: 10.1038/s41589-018-0184-3. Epub 2018 Dec 10.

PMID:
30531910
10.

N6-methyldeoxyadenine is a transgenerational epigenetic signal for mitochondrial stress adaptation.

Ma C, Niu R, Huang T, Shao LW, Peng Y, Ding W, Wang Y, Jia G, He C, Li CY, He A, Liu Y.

Nat Cell Biol. 2018 Dec 3. doi: 10.1038/s41556-018-0238-5. [Epub ahead of print]

PMID:
30510156
11.

Role of human Hv1 channels in sperm capacitation and white blood cell respiratory burst established by a designed peptide inhibitor.

Zhao R, Kennedy K, De Blas GA, Orta G, Pavarotti MA, Arias RJ, de la Vega-Beltrán JL, Li Q, Dai H, Perozo E, Mayorga LS, Darszon A, Goldstein SAN.

Proc Natl Acad Sci U S A. 2018 Dec 11;115(50):E11847-E11856. doi: 10.1073/pnas.1816189115. Epub 2018 Nov 26.

PMID:
30478045
12.

Publisher Correction: Post-transcriptional gene regulation by mRNA modifications.

Zhao BS, Roundtree IA, He C.

Nat Rev Mol Cell Biol. 2018 Dec;19(12):808. doi: 10.1038/s41580-018-0075-1.

PMID:
30341428
13.

Proteoglycans in brain development and pathogenesis.

Schwartz NB, Domowicz MS.

FEBS Lett. 2018 Dec;592(23):3791-3805. doi: 10.1002/1873-3468.13026. Epub 2018 Mar 23. Review.

PMID:
29513405
14.

Butyrophilin3A proteins and Vγ9Vδ2 T cell activation.

Gu S, Borowska MT, Boughter CT, Adams EJ.

Semin Cell Dev Biol. 2018 Dec;84:65-74. doi: 10.1016/j.semcdb.2018.02.007. Epub 2018 Mar 9. Review.

PMID:
29471037

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