Association of Patatin-Based Proteomic Distances with Potato ( Solanum tuberosum L.) Quality Traits

J Agric Food Chem. 2018 Nov 7;66(44):11864-11872. doi: 10.1021/acs.jafc.8b03203. Epub 2018 Oct 24.

Abstract

Patatin is the major tuber storage protein constituted by multiple isoforms highly variable across potato ( S. tuberosum) varieties. Here, we report a first association study of the variability of patatin isoforms between cultivars with their differences in tuber quality traits. Patatin-based proteomic distances were assessed between 15 table and/or processing potato cultivars from profiles of patatin obtained by two-dimensional electrophoresis. The content of ash, dry matter, reducing sugars, starch, total protein, and amino acid composition was also evaluated in tubers of each cultivar. Results showed that proteomic distances were significantly ( P < 0.05) associated with differences in the content of ash, dry matter, and essential amino acids. Proteomic distances were also able to identify outlier cultivars regarding the content of dry matter, content of protein, and protein quality. In conclusion, patatin-based proteomic distances can shorten the screening and selection processes of potato cultivars with advantageous characteristics in molecular breeding.

Keywords: potato breeding; protein-based markers; tuber nutrient content; tuber protein quality; two-dimensional electrophoresis; vegetative storage proteins.

MeSH terms

  • Carboxylic Ester Hydrolases / chemistry
  • Carboxylic Ester Hydrolases / genetics*
  • Carboxylic Ester Hydrolases / metabolism
  • Electrophoresis, Gel, Two-Dimensional
  • Phylogeny
  • Plant Proteins / chemistry
  • Plant Proteins / genetics*
  • Plant Proteins / metabolism
  • Plant Tubers / chemistry
  • Plant Tubers / classification
  • Plant Tubers / genetics
  • Plant Tubers / metabolism
  • Proteomics
  • Solanum tuberosum / chemistry
  • Solanum tuberosum / classification
  • Solanum tuberosum / genetics*
  • Solanum tuberosum / metabolism
  • Starch / analysis
  • Starch / metabolism

Substances

  • Plant Proteins
  • patatin protein, Solanum tuberosum
  • Starch
  • Carboxylic Ester Hydrolases