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Bioinformatics. 2018 Aug 27. doi: 10.1093/bioinformatics/bty742. [Epub ahead of print]

MOLGENIS Research: Advanced bioinformatics data software for non-bioinformaticians.

Author information

1
University of Groningen and University Medical Center Groningen, Genomics Coordination Center, Groningen, The Netherlands.
2
University of Groningen and University Medical Center Groningen, Department of Genetics, Groningen, The Netherlands.
3
University of Groningen and University Medical Center Groningen, Department of Gastroenterology and Hepatology, Groningen, The Netherlands.

Abstract

Motivation:

The volume and complexity of biological data increases rapidly. Many clinical professionals and biomedical researchers without a bioinformatics background are generating big '-omics' data, but do not always have the tools to manage, process or publicly share these data.

Results:

Here we present MOLGENIS Research, an open-source web-application to collect, manage, analyze, visualize and share large and complex biomedical data sets, without the need for advanced bioinformatics skills.

Availability and implementation:

MOLGENIS Research is freely available (open source software). It can be installed from source code (see http://github.com/molgenis), downloaded as a precompiled WAR file (for your own server), setup inside a Docker container (see http://molgenis.github.io), or requested as a Software-as-a-Service subscription. For a public demo instance and complete installation instructions see http://molgenis.org/research.

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