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Bioinformatics. 2018 Aug 7. doi: 10.1093/bioinformatics/bty652. [Epub ahead of print]

MicroPheno: predicting environments and host phenotypes from 16S rRNA gene sequencing using a k-mer based representation of shallow sub-samples.

Author information

1
Molecular Cell Biomechanics Laboratory, Departments of Bioengineering and Mechanical Engineering, University of California, Berkeley, CA, 94720, USA.
2
Computational Biology of Infection Research, Helmholtz Center for Infection Research, 38124 Braunschweig, Germany.
3
Molecular Biophysics and Integrated Bioimaging, Lawrence Berkeley National Lab, Berkeley, CA, 94720, USA.

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