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Bioinformatics. 2018 Aug 7. doi: 10.1093/bioinformatics/bty652. [Epub ahead of print]

MicroPheno: predicting environments and host phenotypes from 16S rRNA gene sequencing using a k-mer based representation of shallow sub-samples.

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Molecular Cell Biomechanics Laboratory, Departments of Bioengineering and Mechanical Engineering, University of California, Berkeley, CA, 94720, USA.
Computational Biology of Infection Research, Helmholtz Center for Infection Research, 38124 Braunschweig, Germany.
Molecular Biophysics and Integrated Bioimaging, Lawrence Berkeley National Lab, Berkeley, CA, 94720, USA.

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