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Ann Hum Genet. 2018 Nov;82(6):396-406. doi: 10.1111/ahg.12261. Epub 2018 Jul 11.

An approach to estimate bidirectional mediation effects with application to body mass index and fasting glucose.

Author information

1
Department of Data Science, The University of Mississippi Medical Center, Jackson, Mississippi.
2
Department of Biostatistics, The University of Texas MD Anderson Cancer Center, Houston, Texas.
3
Department of Epidemiology, The University of Texas MD Anderson Cancer Center, Houston, Texas.

Abstract

Obesity and type 2 diabetes are major public health issues with known interdependence. Genetic variants have been associated with obesity, type 2 diabetes, or both; thus, we hypothesize that some single nucleotide polymorphisms (SNPs) associated with both conditions may be mediated through obesity to affect type 2 diabetes or vice versa. We propose a framework for bidirectional mediation analyses. Simulations show that this approach accurately estimates the parameters, whether the mediation is unidirectional or bidirectional. In many scenarios, when the mediator is regressed on the initial variable and the outcome is regressed on the mediator and the initial variable, the resulting residuals are correlated because of other unmeasured covariates not in the model. We show that the proposed model provides accurate estimates in this scenario, too. We applied the proposed approach to investigate the mediating effects of SNPs associated with type 2 diabetes and obesity using genetic data from the Multi-Ethnic Study of Atherosclerosis cohort. Specifically, we used body mass index (BMI) as a measure for obesity and fasting glucose as a measure for type 2 diabetes. We evaluated the top 6 SNPs associated with both BMI and fasting glucose. Two SNPs (rs3752355 and rs6087982) had indirect effects on BMI mediated through fasting glucose [0.2677; 95% confidence interval (CI) (0.0007, 0.6548) and 0.3301; 95% CI (0.0881, 0.8544), respectively]. The remaining four SNPs (rs7969190, rs4869710, rs10201400, and rs12421620) directly affect BMI and fasting glucose without mediating effects.

KEYWORDS:

Mediation; bidirectionality; body mass index; fasting glucose; genetic association; obesity; type 2 diabetes

PMID:
29993118
PMCID:
PMC6188813
[Available on 2019-11-01]
DOI:
10.1111/ahg.12261
[Indexed for MEDLINE]

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