Expanding the chemical space of anti-HCV NS5A inhibitors by stereochemical exchange and peptidomimetic approaches

Arch Pharm (Weinheim). 2018 Jul;351(7):e1800017. doi: 10.1002/ardp.201800017. Epub 2018 May 25.

Abstract

Here we report a series of potent anti-HCV agents bearing a symmetrical benzidine l-prolinamide backbone with different capping groups including alkyl/aryl carbamates of natural and unnatural valine and leucine amino acids. All compounds were investigated for their inhibitory activity in an HCV replicon assay on genotype 1b. The novel compounds share some chemical and clinical attributes of commercially available NS5A inhibitors. Compounds 5 and 6 with unnatural capping residue and ethyl and isobutyl carbamates showed EC50 values in the picomolar range with a low toxicity profile and selectivity indices of several orders of magnitude. These findings enlarge the chemical space from which NS5A inhibitors may be discovered by adopting unnatural amino acids, amino acids other than valine and carbamates other than methyl as the capping groups.

Keywords: NS5A inhibitors; anti-HCV; bivalent ligands; peptidomimetics.

MeSH terms

  • Amino Acids / chemistry
  • Antiviral Agents / chemical synthesis
  • Antiviral Agents / chemistry
  • Antiviral Agents / pharmacology*
  • Benzidines / chemical synthesis
  • Benzidines / chemistry
  • Benzidines / pharmacology
  • Genotype
  • Hepacivirus / drug effects*
  • Hepacivirus / genetics
  • Peptidomimetics / chemical synthesis
  • Peptidomimetics / chemistry
  • Peptidomimetics / pharmacology*
  • Proline / analogs & derivatives
  • Proline / chemical synthesis
  • Proline / chemistry
  • Proline / pharmacology
  • Stereoisomerism
  • Structure-Activity Relationship
  • Viral Nonstructural Proteins / antagonists & inhibitors*

Substances

  • Amino Acids
  • Antiviral Agents
  • Benzidines
  • Peptidomimetics
  • Viral Nonstructural Proteins
  • Proline
  • NS-5 protein, hepatitis C virus
  • prolinamide