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PLoS One. 2018 May 16;13(5):e0197624. doi: 10.1371/journal.pone.0197624. eCollection 2018.

Genomic variants in an inbred mouse model predict mania-like behaviors.

Author information

1
Carl R. Woese Institute for Genomic Biology, University of Illinois at Urbana-Champaign, Urbana, Illinois, United States of America.
2
Department of Integrative Biology, University of Wisconsin-Madison, Madison, Wisconsin, United States of America.
3
School of Medicine, Yale University, New Haven, Connecticut, United States of America.
4
Waisman Center, University of Wisconsin-Madison, Madison, Wisconsin, United States of America.
5
Neuroscience Training Program, University of Wisconsin-Madison, Madison, Wisconsin, United States of America.

Abstract

Contemporary rodent models for bipolar disorders split the bipolar spectrum into complimentary behavioral endophenotypes representing mania and depression. Widely accepted mania models typically utilize single gene transgenics or pharmacological manipulations, but inbred rodent strains show great potential as mania models. Their acceptance is often limited by the lack of genotypic data needed to establish construct validity. In this study, we used a unique strategy to inexpensively explore and confirm population allele differences in naturally occurring candidate variants in a manic rodent strain, the Madison (MSN) mouse strain. Variants were identified using whole exome resequencing on a small population of animals. Interesting candidate variants were confirmed in a larger population with genotyping. We enriched these results with observations of locomotor behavior from a previous study. Resequencing identified 447 structural variants that are mostly fixed in the MSN strain relative to control strains. After filtering and annotation, we found 11 non-synonymous MSN variants that we believe alter protein function. The allele frequencies for 6 of these variants were consistent with explanatory variants for the Madison strain's phenotype. The variants are in the Npas2, Cp, Polr3c, Smarca4, Trpv1, and Slc5a7 genes, and many of these genes' products are in pathways implicated in human bipolar disorders. Variants in Smarca4 and Polr3c together explained over 40% of the variance in locomotor behavior in the Hsd:ICR founder strain. These results enhance the MSN strain's construct validity and implicate altered nucleosome structure and transcriptional regulation as a chief molecular system underpinning behavior.

PMID:
29768498
PMCID:
PMC5955540
DOI:
10.1371/journal.pone.0197624
[Indexed for MEDLINE]
Free PMC Article

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