Sample and Buffer Preparation for SAXS

Adv Exp Med Biol. 2017:1009:11-30. doi: 10.1007/978-981-10-6038-0_2.

Abstract

In this book chapter, a practical approach for conducting small angle X-ray scattering (SAXS) experiments is given. Our aim is to guide SAXS users through a three-step process of planning, preparing and performing a basic SAXS measurement. The minimal requirements necessary to prepare samples are described specifically for protein and other macromolecular samples in solution. We address the very important aspects in terms of sample characterization using additional techniques as well as the essential role of accurately subtracting background scattering contributions. At the end of the chapter some advice is given for trouble-shooting problems that may occur during the course of the SAXS measurements. Automated pipelines for data processing are described which are useful in allowing users to evaluate the quality of the data 'on the spot' and consequently react to events such as radiation damage, the presence of unwanted sample aggregates or miss-matched buffers.

Keywords: Quality control; Sample preparation; Solvent matching.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Artifacts
  • Buffers
  • Chemistry Techniques, Analytical / instrumentation*
  • Free Radical Scavengers / chemistry*
  • Humans
  • Protein Aggregates
  • Protein Conformation
  • Proteins / chemistry
  • Proteins / ultrastructure*
  • Research Design
  • Scattering, Small Angle*
  • Specimen Handling / methods
  • Specimen Handling / standards
  • Synchrotrons / instrumentation*
  • X-Ray Diffraction / instrumentation
  • X-Ray Diffraction / methods
  • X-Ray Diffraction / standards*

Substances

  • Buffers
  • Free Radical Scavengers
  • Protein Aggregates
  • Proteins