Environment and geographic distance differ in relative importance for determining fungal community of rhizosphere and bulk soil

Environ Microbiol. 2017 Sep;19(9):3649-3659. doi: 10.1111/1462-2920.13865. Epub 2017 Sep 12.

Abstract

Rhizospheric fungi play major roles in both natural and agricultural ecosystems. However, little is known about the determinants of their diversity and biogeographic patterns. Here, we compared fungal communities in rhizosphere and bulk soils of wheat fields in the North China Plain. The rhizosphere had a lower fungal diversity (observed OTUs and Chao1) than bulk soil, and a distinct fungal community structure in rhizosphere compared with bulk soil. The relative importance of environmental factors and geographic distance for fungal distribution differed between rhizosphere and bulk soil. Environmental factors were the primary cause of variations in total fungal community and major fungal phyla in bulk soil. By contrast, fungal communities in soils loosely attached to roots were predictable from both environmental factors and influences of geographic distance. Communities in soils tightly attached to roots were mainly determined by geographic distance. Our results suggest that both contemporary environment processes (present-day abiotic and biotic environment characters) and historical processes (spatial isolation, dispersal limitation occurred in the past) dominate variations of fungal communities in wheat fields, but their relative importance of all these processes depends on the proximity of fungal community to the plant roots.

MeSH terms

  • Agriculture
  • Ascomycota / classification*
  • Ascomycota / genetics
  • Ascomycota / isolation & purification
  • Basidiomycota / classification*
  • Basidiomycota / genetics
  • Basidiomycota / isolation & purification
  • China
  • DNA, Intergenic / genetics
  • Ecosystem
  • Environment
  • Plant Roots / microbiology*
  • Rhizosphere*
  • Soil / chemistry
  • Soil Microbiology*
  • Triticum / microbiology*

Substances

  • DNA, Intergenic
  • Soil