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Hum Mol Genet. 2017 Aug 15;26(16):3221-3231. doi: 10.1093/hmg/ddx194.

Tea and coffee consumption in relation to DNA methylation in four European cohorts.

Author information

1
Department of Immunology, Genetics and Pathology, Science for Life Laboratory, Uppsala, Sweden.
2
Department of Human Nutrition, Wageningen University, Wageningen, The Netherlands.
3
Uppsala Clinical Research Center, Uppsala University, Uppsala, Sweden.
4
Department of Evolutionary Biology and Environmental Studies.
5
Epidemiology, Biostatistics and Prevention Institute, University of Zurich, Zurich, Switzerland.
6
National Hellenic Research Foundation, Institute of Biology, Medicinal Chemistry and Biotechnology, Athens, Greece.
7
Epidemiology, Mailman School of Public Health, Columbia University, New York, NY, USA.
8
Molecular Epidemiology, Leiden University Medical Center, Leiden, The Netherlands.
9
Department of Biobank Research, and Occupational and Environmental Medicine, Department of Public Health and Clinical Medicine, Umeå University, Umeå, Sweden.
10
The Institute for Cancer Research and Prevention, Florence, Italy.
11
Division of Cardiovascular Medicine, Department of Medicine, Stanford University School of Medicine, Stanford, CA 94305, USA.
12
Department of Medical Sciences, Molecular Epidemiology and Science for Life Laboratory, Uppsala University, Uppsala, Sweden.
13
Department of Public Health and Clinical Medicine, Nutritional Research, Umeå University, Umeå, Sweden.
14
Department of Epidemiology and Biostatistics, MRC-HPA Centre for Environment and Health, Imperial College London, St Mary's Campus, London, UK.
15
Department of Medical Sciences, Cardiovascular Epidemiology, Uppsala University Hospital, 75185 Uppsala, Sweden.
16
Epigenetics Unit, Department of Surgery and Cancer, Imperial College London, London, UK.

Abstract

Lifestyle factors, such as food choices and exposure to chemicals, can alter DNA methylation and lead to changes in gene activity. Two such exposures with pharmacologically active components are coffee and tea consumption. Both coffee and tea have been suggested to play an important role in modulating disease-risk in humans by suppressing tumour progression, decreasing inflammation and influencing estrogen metabolism. These mechanisms may be mediated by changes in DNA methylation. To investigate if DNA methylation in blood is associated with coffee and tea consumption, we performed a genome-wide DNA methylation study for coffee and tea consumption in four European cohorts (N = 3,096). DNA methylation was measured from whole blood at 421,695 CpG sites distributed throughout the genome and analysed in men and women both separately and together in each cohort. Meta-analyses of the results and additional regional-level analyses were performed. After adjusting for multiple testing, the meta-analysis revealed that two individual CpG-sites, mapping to DNAJC16 and TTC17, were differentially methylated in relation to tea consumption in women. No individual sites were associated with men or with the sex-combined analysis for tea or coffee. The regional analysis revealed that 28 regions were differentially methylated in relation to tea consumption in women. These regions contained genes known to interact with estradiol metabolism and cancer. No significant regions were found in the sex-combined and male-only analysis for either tea or coffee consumption.

PMID:
28535255
DOI:
10.1093/hmg/ddx194
[Indexed for MEDLINE]
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