In-depth proteomic profiling of left ventricular tissues in human end-stage dilated cardiomyopathy

Oncotarget. 2017 Jul 18;8(29):48321-48332. doi: 10.18632/oncotarget.15689.

Abstract

Dilated cardiomyopathy (DCM) is caused by reduced left ventricular (LV) myocardial function, which is one of the most common causes of heart failure (HF). We performed iTRAQ-coupled 2D-LC-MS/MS to profile the cardiac proteome of LV tissues from healthy controls and patients with end-stage DCM. We identified 4263 proteins, of which 125 were differentially expressed in DCM tissues compared to LV controls. The majority of these were membrane proteins related to cellular junctions and neuronal metabolism. In addition, these proteins were involved in membrane organization, mitochondrial organization, translation, protein transport, and cell death process. Four key proteins involved in the cell death process were also detected by western blotting, indicated that cell death was activated in DCM tissues. Furthermore, S100A1 and eEF2 were enriched in the "cellular assembly and organization" and "cell cycle" networks, respectively. We verified decreases in these two proteins in end-stage DCM LV samples through multiple reaction monitoring (MRM). These observations demonstrate that our understanding of the mechanisms underlying DCM can be deepened through comparison of the proteomes of normal LV tissues with that from end-stage DCM in humans.

Keywords: S100A1; cell death; dilated cardiomyopathy; eEF2; left ventricle.

MeSH terms

  • Adult
  • Aged
  • Biomarkers
  • Cardiomyopathy, Dilated / metabolism*
  • Cardiomyopathy, Dilated / pathology*
  • Cardiomyopathy, Dilated / physiopathology
  • Cell Cycle / genetics
  • Chromatography, Liquid
  • Computational Biology / methods
  • Elongation Factor 2 Kinase / metabolism
  • Female
  • Gene Ontology
  • Heart Function Tests
  • Heart Ventricles / metabolism*
  • Humans
  • Male
  • Mass Spectrometry
  • Middle Aged
  • Proteome*
  • Proteomics* / methods
  • S100 Proteins / metabolism
  • Young Adult

Substances

  • Biomarkers
  • Proteome
  • S100 Proteins
  • S100A1 protein
  • Elongation Factor 2 Kinase