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Genome Biol Evol. 2017 May 1;9(5):1312-1319. doi: 10.1093/gbe/evx069.

DeCoSTAR: Reconstructing the Ancestral Organization of Genes or Genomes Using Reconciled Phylogenies.

Author information

1
Inria Grenoble Rhône-Alpes, Montbonnot, France.
2
Université de Lyon, Université Lyon 1, CNRS, Laboratoire de Biométrie et Biologie Évolutive UMR5558, Villeurbanne, France.
3
Institut des Sciences de l'Évolution, Université de Montpellier, CNRS, IRD, EPHE, Montpellier, France.
4
Experimental Algorithmics Lab (AlgoLab), Dipartimento di Informatica, Sistemistica e Comunicazione (DISCo), Università degli Studi di Milano-Bicocca, Viale Sarca, Milano, Italy.
5
CNRS, Ecole Polytechnique, LIX UMR7161, Palaiseau, France.
6
Inria Saclay, EP AMIB, Palaiseau, France.
7
LIRMM, Université de Montpellier, CNRS, Montpellier, France.
8
Department of Mathematics, Simon Fraser University, Burnaby, British Columbia, Canada.

Abstract

http://pbil.univ-lyon1.fr/software/DeCoSTAR (Last accessed April 24, 2017).

KEYWORDS:

evolution; gene fusion/fission; gene order; protein domain; rearrangements; reconciliation; software

PMID:
28402423
PMCID:
PMC5441342
DOI:
10.1093/gbe/evx069
[Indexed for MEDLINE]
Free PMC Article

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