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Bioinformatics. 2017 Mar 15;33(6):935-937. doi: 10.1093/bioinformatics/btw756.

The PPI3D web server for searching, analyzing and modeling protein-protein interactions in the context of 3D structures.

Author information

1
Institute of Biotechnology, Vilnius University, Vilnius, Lithuania.
2
Faculty of Mathematics and Informatics, Vilnius University, Vilnius, Lithuania.

Abstract

Summary:

The PPI3D web server is focused on searching and analyzing the structural data on protein-protein interactions. Reducing the data redundancy by clustering and analyzing the properties of interaction interfaces using Voronoi tessellation makes this software a highly effective tool for addressing different questions related to protein interactions.

Availability and Implementation:

The server is freely accessible at http://bioinformatics.lt/software/ppi3d/ .

Contact:

ceslovas.venclovas@bti.vu.lt.

Supplementary information:

Supplementary data are available at Bioinformatics online.

PMID:
28011769
DOI:
10.1093/bioinformatics/btw756
[Indexed for MEDLINE]

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