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Bioinformatics. 2016 Jul 1;32(13):2067-8. doi: 10.1093/bioinformatics/btw102. Epub 2016 Feb 26.

NMRPro: an integrated web component for interactive processing and visualization of NMR spectra.

Author information

1
Bioinformatics Center, Institute for Chemical Research, Kyoto University, Kyoto, Japan.

Abstract

The popularity of using NMR spectroscopy in metabolomics and natural products has driven the development of an array of NMR spectral analysis tools and databases. Particularly, web applications are well used recently because they are platform-independent and easy to extend through reusable web components. Currently available web applications provide the analysis of NMR spectra. However, they still lack the necessary processing and interactive visualization functionalities. To overcome these limitations, we present NMRPro, a web component that can be easily incorporated into current web applications, enabling easy-to-use online interactive processing and visualization. NMRPro integrates server-side processing with client-side interactive visualization through three parts: a python package to efficiently process large NMR datasets on the server-side, a Django App managing server-client interaction, and SpecdrawJS for client-side interactive visualization.

AVAILABILITY AND IMPLEMENTATION:

Demo and installation instructions are available at http://mamitsukalab.org/tools/nmrpro/

CONTACT:

mohamed@kuicr.kyoto-u.ac.jp

SUPPLEMENTARY INFORMATION:

Supplementary data are available at Bioinformatics online.

PMID:
27153725
DOI:
10.1093/bioinformatics/btw102
[Indexed for MEDLINE]

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