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Nat Commun. 2016 Apr 26;7:11106. doi: 10.1038/ncomms11106.

Diverse human extracellular RNAs are widely detected in human plasma.

Author information

  • 1University of Massachusetts Medical School, Department of Medicine, Division of Cardiovascular Medicine, Worcester, Massachusetts 01605, USA.
  • 2Yale University Medical School, Computational Biology and Bioinformatics Program, New Haven, Connecticut 06520, USA.
  • 3University of Massachusetts Medical School, Department of Quantitative Health Sciences, Worcester, Massachusetts 01605, USA.
  • 4The Framingham Heart Study, Framingham, Massachusetts 01702, USA.
  • 5Population Sciences Branch, National Heart, Lung, and Blood Institute, National Institutes of Health, Bethesda, Maryland 20824, USA.
  • 6Cardiovascular Institute, Beth Israel Deaconess Medical Center, Boston, Massachusetts 02215, USA.
  • 7Center for Cancer Computational Biology, Dana Farber Cancer Institute, Boston, Massachusetts 02215, USA.
  • 8Cardiovascular Division, Department of Medicine, Brigham and Women's Hospital, Boston, Massachusetts 02115, USA.
  • 9University of Michigan, Ann Arbor, Michigan 48409, USA.

Abstract

There is growing appreciation for the importance of non-protein-coding genes in development and disease. Although much is known about microRNAs, limitations in bioinformatic analyses of RNA sequencing have precluded broad assessment of other forms of small-RNAs in humans. By analysing sequencing data from plasma-derived RNA from 40 individuals, here we identified over a thousand human extracellular RNAs including microRNAs, piwi-interacting RNA (piRNA), and small nucleolar RNAs. Using a targeted quantitative PCR with reverse transcription approach in an additional 2,763 individuals, we characterized almost 500 of the most abundant extracellular transcripts including microRNAs, piRNAs and small nucleolar RNAs. The presence in plasma of many non-microRNA small-RNAs was confirmed in an independent cohort. We present comprehensive data to demonstrate the broad and consistent detection of diverse classes of circulating non-cellular small-RNAs from a large population.

PMID:
27112789
PMCID:
PMC4853467
DOI:
10.1038/ncomms11106
[PubMed - indexed for MEDLINE]
Free PMC Article
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