Complete genome sequence of Arthrobacter alpinus ERGS4:06, a yellow pigmented bacterium tolerant to cold and radiations isolated from Sikkim Himalaya

J Biotechnol. 2016 Feb 20:220:86-7. doi: 10.1016/j.jbiotec.2016.01.016. Epub 2016 Jan 19.

Abstract

Arthrobacter alpinus ERGS4:06, a yellow pigmented bacterium which exhibited tolerance to cold and UV radiations was isolated from the glacial stream of East Rathong glacier in Sikkim Himalaya. Here we report the 4.3Mb complete genome assembly that has provided the basis for potential role of pigments as a survival strategy to combat stressed environment of cold and high UV-radiation and additionally the ability to produce cold active industrial enzymes.

Keywords: Arthrobacter alpinus ERGS4:06; Cold active enzymes; Complete genome sequence; Pigments; SMRT sequencing; UV tolerance.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Arthrobacter / genetics*
  • Arthrobacter / isolation & purification
  • Arthrobacter / radiation effects
  • Base Composition
  • Base Sequence
  • Chromosome Mapping
  • Cold Temperature
  • DNA, Bacterial / genetics
  • DNA, Ribosomal / genetics
  • Genome Size
  • Genome, Bacterial*
  • Ice Cover / microbiology
  • Molecular Sequence Data
  • Pigmentation / physiology
  • RNA, Ribosomal / genetics
  • RNA, Ribosomal, 16S / genetics
  • Sikkim
  • Stress, Physiological

Substances

  • DNA, Bacterial
  • DNA, Ribosomal
  • RNA, Ribosomal
  • RNA, Ribosomal, 16S