Biomass accessibility analysis using electron tomography

Biotechnol Biofuels. 2015 Dec 25:8:212. doi: 10.1186/s13068-015-0395-8. eCollection 2015.

Abstract

Background: Substrate accessibility to catalysts has been a dominant theme in theories of biomass deconstruction. However, current methods of quantifying accessibility do not elucidate mechanisms for increased accessibility due to changes in microstructure following pretreatment.

Results: We introduce methods for characterization of surface accessibility based on fine-scale microstructure of the plant cell wall as revealed by 3D electron tomography. These methods comprise a general framework, enabling analysis of image-based cell wall architecture using a flexible model of accessibility. We analyze corn stover cell walls, both native and after undergoing dilute acid pretreatment with and without a steam explosion process, as well as AFEX pretreatment.

Conclusion: Image-based measures provide useful information about how much pretreatments are able to increase biomass surface accessibility to a wide range of catalyst sizes. We find a strong dependence on probe size when measuring surface accessibility, with a substantial decrease in biomass surface accessibility to probe sizes above 5-10 nm radius compared to smaller probes.

Keywords: Accessibility; Biomass; Cellulose; Porosimetry; Pretreatment; Tomography.