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Bioinformatics. 2016 Jan 15;32(2):283-5. doi: 10.1093/bioinformatics/btv546. Epub 2015 Sep 22.

Approximately independent linkage disequilibrium blocks in human populations.

Author information

1
New York Genome Center, New York, NY 10013, USA and.
2
New York Genome Center, New York, NY 10013, USA and Department of Biological Sciences, Columbia University, New York, NY 10027, USA.

Abstract

We present a method to identify approximately independent blocks of linkage disequilibrium in the human genome. These blocks enable automated analysis of multiple genome-wide association studies.

AVAILABILITY AND IMPLEMENTATION:

code: http://bitbucket.org/nygcresearch/ldetect; data: http://bitbucket.org/nygcresearch/ldetect-data.

CONTACT:

tberisa@nygenome.org

SUPPLEMENTARY INFORMATION:

Supplementary data are available at Bioinformatics online.

PMID:
26395773
PMCID:
PMC4731402
DOI:
10.1093/bioinformatics/btv546
[Indexed for MEDLINE]
Free PMC Article

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