Application of Genetic Algorithm to Predict Optimal Sowing Region and Timing for Kentucky Bluegrass in China

PLoS One. 2015 Jul 8;10(7):e0131489. doi: 10.1371/journal.pone.0131489. eCollection 2015.

Abstract

Temperature is a predominant environmental factor affecting grass germination and distribution. Various thermal-germination models for prediction of grass seed germination have been reported, in which the relationship between temperature and germination were defined with kernel functions, such as quadratic or quintic function. However, their prediction accuracies warrant further improvements. The purpose of this study is to evaluate the relative prediction accuracies of genetic algorithm (GA) models, which are automatically parameterized with observed germination data. The seeds of five P. pratensis (Kentucky bluegrass, KB) cultivars were germinated under 36 day/night temperature regimes ranging from 5/5 to 40/40 °C with 5 °C increments. Results showed that optimal germination percentages of all five tested KB cultivars were observed under a fluctuating temperature regime of 20/25 °C. Meanwhile, the constant temperature regimes (e.g., 5/5, 10/10, 15/15 °C, etc.) suppressed the germination of all five cultivars. Furthermore, the back propagation artificial neural network (BP-ANN) algorithm was integrated to optimize temperature-germination response models from these observed germination data. It was found that integrations of GA-BP-ANN (back propagation aided genetic algorithm artificial neural network) significantly reduced the Root Mean Square Error (RMSE) values from 0.21~0.23 to 0.02~0.09. In an effort to provide a more reliable prediction of optimum sowing time for the tested KB cultivars in various regions in the country, the optimized GA-BP-ANN models were applied to map spatial and temporal germination percentages of blue grass cultivars in China. Our results demonstrate that the GA-BP-ANN model is a convenient and reliable option for constructing thermal-germination response models since it automates model parameterization and has excellent prediction accuracy.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Algorithms*
  • China
  • Circadian Rhythm
  • Germination
  • Models, Theoretical
  • Poa / growth & development*
  • Seasons
  • Temperature
  • Time Factors

Grants and funding

This work was partially supported by grants 31301053 and U1130304 from the National Science Foundation of China, and grant CN201302 from the Science and Technology Project of Changshu City. The funders had no role in study design, data collection and analysis, decision to publish, or preparation of the manuscript.