Format

Send to

Choose Destination
Mitochondrial DNA A DNA Mapp Seq Anal. 2016 Jul;27(4):3048-9. doi: 10.3109/19401736.2015.1063128. Epub 2015 Jul 8.

The complete chloroplast genome of the Dendrobium strongylanthum (Orchidaceae: Epidendroideae).

Author information

1
a Key Laboratory of the Ministry of Education for Medicinal Resources and Natural Pharmaceutical Chemistry , National Engineering Laboratory for Resource Development of Endangered Crude Drugs in Northwest China, College of Life Sciences, Shaanxi Normal University , Xi'an , P R China.

Abstract

Complete chloroplast genome sequence is very useful for studying the phylogenetic and evolution of species. In this study, the complete chloroplast genome of Dendrobium strongylanthum was constructed from whole-genome Illumina sequencing data. The chloroplast genome is 153 058 bp in length with 37.6% GC content and consists of two inverted repeats (IRs) of 26 316 bp. The IR regions are separated by large single-copy region (LSC, 85 836 bp) and small single-copy (SSC, 14 590 bp) region. A total of 130 chloroplast genes were successfully annotated, including 84 protein coding genes, 38 tRNA genes, and eight rRNA genes. Phylogenetic analyses showed that the chloroplast genome of Dendrobium strongylanthum is related to that of the Dendrobium officinal.

KEYWORDS:

Chloroplast genome; Dendrobium strongylanthum; Illumina sequencing; MITObim

PMID:
26153739
DOI:
10.3109/19401736.2015.1063128
[Indexed for MEDLINE]

Supplemental Content

Loading ...
Support Center