Sinomonas susongensis sp. nov., isolated from the surface of weathered biotite

Int J Syst Evol Microbiol. 2015 Apr;65(Pt 4):1133-1137. doi: 10.1099/ijs.0.000064. Epub 2015 Jan 14.

Abstract

A novel actinomycete, designated strain A31(T), was isolated from the surface of weathered biotite in Susong, Anhui Province, China. The organism grew optimally at 30 °C, at pH 8.0 and with 1% (w/v) NaCl. Strain A31(T) had A3α as the cell-wall peptidoglycan type and galactose, mannose and rhamnose as whole-cell sugars. Anteiso-C(15 : 0) and anteiso-C(17 : 0) were the major cellular fatty acids and MK-9(H2) was the predominant respiratory quinone. In addition, the total polar lipids were diphosphatidylglycerol, phosphatidylglycerol, phosphatidylinositol, phosphatidylmonomethylethanolamine and four glycolipids. The genomic DNA G+C content of strain A31(T) was 70.8 mol%. Phylogenetic analysis based on 16S rRNA gene sequences showed that strain A31(T) was related most closely to Sinomonas albida LC13(T) (98.3% similarity), Sinomonas atrocyanea DSM 20127(T) (98.2%), Sinomonas soli CW 59(T) (98.1%), Sinomonas flava CW 108(T) (97.8%), 'Sinomonas mesophila' MPKL 26 (97.3%), Sinomonas echigonensis LC10(T) (97.1%) and ' Sinomonas notoginsengisoli ' SYP-B575 (96.7%). DNA-DNA hybridization studies with the new isolate showed relatedness values of 16.0-56.6% with its six closest neighbours. Based on phenotypic, chemotaxonomic and phylogenetic analysis, strain A31(T) represents a novel species of the genus Sinomonas , for which the name Sinomonas susongensis sp. nov. is proposed. The type strain is A31(T) ( = DSM 28245(T) = CCTCC AB 2014068(T)).

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Aluminum Silicates*
  • Bacterial Typing Techniques
  • Base Composition
  • China
  • DNA, Bacterial / genetics
  • Fatty Acids / chemistry
  • Ferrous Compounds*
  • Glycolipids / chemistry
  • Micrococcaceae / classification*
  • Micrococcaceae / genetics
  • Micrococcaceae / isolation & purification
  • Molecular Sequence Data
  • Nucleic Acid Hybridization
  • Peptidoglycan / chemistry
  • Phylogeny*
  • RNA, Ribosomal, 16S / genetics
  • Sequence Analysis, DNA
  • Soil Microbiology*
  • Vitamin K 2 / analogs & derivatives
  • Vitamin K 2 / chemistry

Substances

  • Aluminum Silicates
  • DNA, Bacterial
  • Fatty Acids
  • Ferrous Compounds
  • Glycolipids
  • Peptidoglycan
  • RNA, Ribosomal, 16S
  • Vitamin K 2
  • biotite
  • menaquinone 9

Associated data

  • GENBANK/KC841860