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Genetics. 2015 Feb;199(2):359-61. doi: 10.1534/genetics.114.172742. Epub 2014 Dec 18.

R/qtlcharts: interactive graphics for quantitative trait locus mapping.

Author information

  • 1Department of Biostatistics and Medical Informatics, University of Wisconsin-Madison, Madison, Wisconsin 53706 kbroman@biostat.wisc.edu.

Abstract

Every data visualization can be improved with some level of interactivity. Interactive graphics hold particular promise for the exploration of high-dimensional data. R/qtlcharts is an R package to create interactive graphics for experiments to map quantitative trait loci (QTL) (genetic loci that influence quantitative traits). R/qtlcharts serves as a companion to the R/qtl package, providing interactive versions of R/qtl's static graphs, as well as additional interactive graphs for the exploration of high-dimensional genotype and phenotype data.

KEYWORDS:

D3; QTL; data visualization; software

PMID:
25527287
PMCID:
PMC4317647
DOI:
10.1534/genetics.114.172742
[PubMed - indexed for MEDLINE]
Free PMC Article
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